Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC32.35■■■□□ 2.77
Ccdc180J3QNE4 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
Ccdc180J3QNE4 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
Ccdc180J3QNE4 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC32.34■■■□□ 2.77
Ccdc180J3QNE4 Gm17807-201ENSMUST00000186869 298 ntBASIC32.34■■■□□ 2.77
Ccdc180J3QNE4 Umpk-ps-201ENSMUST00000211897 827 ntBASIC32.34■■■□□ 2.77
Ccdc180J3QNE4 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
Ccdc180J3QNE4 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
Ccdc180J3QNE4 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Ccdc180J3QNE4 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC32.34■■■□□ 2.77
Ccdc180J3QNE4 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Ccdc180J3QNE4 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Ccdc180J3QNE4 Gm11950-201ENSMUST00000121615 838 ntBASIC32.34■■■□□ 2.77
Ccdc180J3QNE4 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC32.34■■■□□ 2.77
Ccdc180J3QNE4 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC32.34■■■□□ 2.77
Ccdc180J3QNE4 Gm7213-201ENSMUST00000215977 950 ntBASIC32.34■■■□□ 2.77
Ccdc180J3QNE4 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Ccdc180J3QNE4 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
Ccdc180J3QNE4 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
Ccdc180J3QNE4 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Ccdc180J3QNE4 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
Ccdc180J3QNE4 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC32.33■■■□□ 2.77
Ccdc180J3QNE4 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
Ccdc180J3QNE4 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC32.33■■■□□ 2.77
Ccdc180J3QNE4 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC32.33■■■□□ 2.77
Ccdc180J3QNE4 Gm18669-201ENSMUST00000216049 778 ntBASIC32.33■■■□□ 2.77
Ccdc180J3QNE4 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
Ccdc180J3QNE4 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC32.32■■■□□ 2.77
Ccdc180J3QNE4 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
Ccdc180J3QNE4 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC32.32■■■□□ 2.76
Ccdc180J3QNE4 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
Ccdc180J3QNE4 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
Ccdc180J3QNE4 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
Ccdc180J3QNE4 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC32.31■■■□□ 2.76
Ccdc180J3QNE4 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC32.31■■■□□ 2.76
Ccdc180J3QNE4 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC32.31■■■□□ 2.76
Ccdc180J3QNE4 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
Ccdc180J3QNE4 Gm42922-201ENSMUST00000195887 2078 ntBASIC32.31■■■□□ 2.76
Ccdc180J3QNE4 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC32.31■■■□□ 2.76
Ccdc180J3QNE4 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC32.3■■■□□ 2.76
Ccdc180J3QNE4 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Ccdc180J3QNE4 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Ccdc180J3QNE4 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Ccdc180J3QNE4 Gm11860-201ENSMUST00000122346 1010 ntBASIC32.29■■■□□ 2.76
Ccdc180J3QNE4 Gm27704-201ENSMUST00000185094 107 ntBASIC32.29■■■□□ 2.76
Ccdc180J3QNE4 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Ccdc180J3QNE4 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
Ccdc180J3QNE4 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Ccdc180J3QNE4 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC32.28■■■□□ 2.76
Ccdc180J3QNE4 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Ccdc180J3QNE4 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Ccdc180J3QNE4 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Ccdc180J3QNE4 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC32.27■■■□□ 2.76
Ccdc180J3QNE4 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
Ccdc180J3QNE4 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
Ccdc180J3QNE4 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC32.27■■■□□ 2.76
Ccdc180J3QNE4 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC32.27■■■□□ 2.76
Ccdc180J3QNE4 AC120002.2-201ENSMUST00000220205 773 ntBASIC32.27■■■□□ 2.76
Ccdc180J3QNE4 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC32.27■■■□□ 2.76
Ccdc180J3QNE4 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC32.27■■■□□ 2.76
Ccdc180J3QNE4 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
Ccdc180J3QNE4 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC32.27■■■□□ 2.76
Ccdc180J3QNE4 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC32.27■■■□□ 2.76
Ccdc180J3QNE4 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC32.27■■■□□ 2.76
Ccdc180J3QNE4 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
Ccdc180J3QNE4 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
Ccdc180J3QNE4 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC32.26■■■□□ 2.76
Ccdc180J3QNE4 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
Ccdc180J3QNE4 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC32.26■■■□□ 2.75
Ccdc180J3QNE4 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC32.26■■■□□ 2.75
Ccdc180J3QNE4 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
Ccdc180J3QNE4 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
Ccdc180J3QNE4 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC32.26■■■□□ 2.75
Ccdc180J3QNE4 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
Ccdc180J3QNE4 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC32.26■■■□□ 2.75
Ccdc180J3QNE4 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
Ccdc180J3QNE4 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
Ccdc180J3QNE4 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC32.25■■■□□ 2.75
Ccdc180J3QNE4 Actl10-202ENSMUST00000226583 1501 ntBASIC32.25■■■□□ 2.75
Ccdc180J3QNE4 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC32.25■■■□□ 2.75
Ccdc180J3QNE4 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
Ccdc180J3QNE4 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Ccdc180J3QNE4 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Ccdc180J3QNE4 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC32.25■■■□□ 2.75
Ccdc180J3QNE4 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Ccdc180J3QNE4 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC32.25■■■□□ 2.75
Ccdc180J3QNE4 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Ccdc180J3QNE4 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Ccdc180J3QNE4 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC32.24■■■□□ 2.75
Ccdc180J3QNE4 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Ccdc180J3QNE4 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC32.24■■■□□ 2.75
Ccdc180J3QNE4 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Ccdc180J3QNE4 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Ccdc180J3QNE4 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC32.23■■■□□ 2.75
Ccdc180J3QNE4 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC32.23■■■□□ 2.75
Ccdc180J3QNE4 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
Ccdc180J3QNE4 Gm3272-201ENSMUST00000181181 1229 ntBASIC32.23■■■□□ 2.75
Ccdc180J3QNE4 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
Ccdc180J3QNE4 Gm10566-201ENSMUST00000086739 996 ntBASIC32.23■■■□□ 2.75
Ccdc180J3QNE4 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms