Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gm7370-201ENSMUST00000219471 767 ntBASIC21.24■□□□□ 0.99
NpcdF8VQB8 Otx2os1-206ENSMUST00000228153 787 ntBASIC21.24■□□□□ 0.99
NpcdF8VQB8 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
NpcdF8VQB8 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
NpcdF8VQB8 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
NpcdF8VQB8 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
NpcdF8VQB8 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
NpcdF8VQB8 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
NpcdF8VQB8 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
NpcdF8VQB8 Gm37352-201ENSMUST00000193908 2181 ntBASIC21.23■□□□□ 0.99
NpcdF8VQB8 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
NpcdF8VQB8 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
NpcdF8VQB8 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC21.23■□□□□ 0.99
NpcdF8VQB8 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NpcdF8VQB8 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC21.23■□□□□ 0.99
NpcdF8VQB8 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC21.23■□□□□ 0.99
NpcdF8VQB8 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC21.23■□□□□ 0.99
NpcdF8VQB8 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC21.23■□□□□ 0.99
NpcdF8VQB8 Spr-ps1-201ENSMUST00000089584 605 ntBASIC21.23■□□□□ 0.99
NpcdF8VQB8 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC21.23■□□□□ 0.99
NpcdF8VQB8 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
NpcdF8VQB8 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NpcdF8VQB8 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
NpcdF8VQB8 Spsb2-203ENSMUST00000112473 1322 ntBASIC21.23■□□□□ 0.99
NpcdF8VQB8 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NpcdF8VQB8 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC21.23■□□□□ 0.99
NpcdF8VQB8 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
NpcdF8VQB8 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NpcdF8VQB8 Gm11950-201ENSMUST00000121615 838 ntBASIC21.22■□□□□ 0.99
NpcdF8VQB8 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NpcdF8VQB8 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
NpcdF8VQB8 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
NpcdF8VQB8 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NpcdF8VQB8 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
NpcdF8VQB8 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC21.22■□□□□ 0.99
NpcdF8VQB8 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
NpcdF8VQB8 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
NpcdF8VQB8 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NpcdF8VQB8 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NpcdF8VQB8 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
NpcdF8VQB8 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
NpcdF8VQB8 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NpcdF8VQB8 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC21.21■□□□□ 0.99
NpcdF8VQB8 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NpcdF8VQB8 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
NpcdF8VQB8 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NpcdF8VQB8 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NpcdF8VQB8 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
NpcdF8VQB8 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NpcdF8VQB8 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
NpcdF8VQB8 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NpcdF8VQB8 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
NpcdF8VQB8 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NpcdF8VQB8 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
NpcdF8VQB8 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
NpcdF8VQB8 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NpcdF8VQB8 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC21.2■□□□□ 0.98
NpcdF8VQB8 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC21.2■□□□□ 0.98
NpcdF8VQB8 Gm7791-201ENSMUST00000219066 539 ntBASIC21.2■□□□□ 0.98
NpcdF8VQB8 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC21.2■□□□□ 0.98
NpcdF8VQB8 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NpcdF8VQB8 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
NpcdF8VQB8 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC21.2■□□□□ 0.98
NpcdF8VQB8 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
NpcdF8VQB8 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NpcdF8VQB8 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NpcdF8VQB8 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
NpcdF8VQB8 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NpcdF8VQB8 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NpcdF8VQB8 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC21.2■□□□□ 0.98
NpcdF8VQB8 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NpcdF8VQB8 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NpcdF8VQB8 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NpcdF8VQB8 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
NpcdF8VQB8 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NpcdF8VQB8 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC21.19■□□□□ 0.98
NpcdF8VQB8 Gm28659-201ENSMUST00000188013 759 ntBASIC21.19■□□□□ 0.98
NpcdF8VQB8 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC21.19■□□□□ 0.98
NpcdF8VQB8 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NpcdF8VQB8 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
NpcdF8VQB8 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NpcdF8VQB8 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
NpcdF8VQB8 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
NpcdF8VQB8 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NpcdF8VQB8 AC126028.2-201ENSMUST00000228100 1833 ntBASIC21.18■□□□□ 0.98
NpcdF8VQB8 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
NpcdF8VQB8 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NpcdF8VQB8 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NpcdF8VQB8 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC21.18■□□□□ 0.98
NpcdF8VQB8 Gm7638-201ENSMUST00000121348 967 ntBASIC21.18■□□□□ 0.98
NpcdF8VQB8 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NpcdF8VQB8 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC21.18■□□□□ 0.98
NpcdF8VQB8 Gm27742-201ENSMUST00000184667 60 ntBASIC21.18■□□□□ 0.98
NpcdF8VQB8 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC21.18■□□□□ 0.98
NpcdF8VQB8 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NpcdF8VQB8 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NpcdF8VQB8 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC21.18■□□□□ 0.98
NpcdF8VQB8 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NpcdF8VQB8 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NpcdF8VQB8 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms