Protein–RNA interactions for Protein: E9Q555

Rnf213, E3 ubiquitin-protein ligase RNF213, mousemouse

Known RBP Predictions only

Length 5,152 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf213E9Q555 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC8.61□□□□□ -1.03
Rnf213E9Q555 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Rnf213E9Q555 Gm24841-201ENSMUST00000158676 357 ntBASIC8.61□□□□□ -1.03
Rnf213E9Q555 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Rnf213E9Q555 Gm2213-201ENSMUST00000197485 688 ntBASIC8.61□□□□□ -1.03
Rnf213E9Q555 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Rnf213E9Q555 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Rnf213E9Q555 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Rnf213E9Q555 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC8.61□□□□□ -1.03
Rnf213E9Q555 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Rnf213E9Q555 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC8.61□□□□□ -1.03
Rnf213E9Q555 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC8.61□□□□□ -1.03
Rnf213E9Q555 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC8.61□□□□□ -1.03
Rnf213E9Q555 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC8.61□□□□□ -1.03
Rnf213E9Q555 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Rnf213E9Q555 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Rnf213E9Q555 Gm13127-201ENSMUST00000118978 1389 ntBASIC8.61□□□□□ -1.03
Rnf213E9Q555 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Rnf213E9Q555 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Rnf213E9Q555 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Rnf213E9Q555 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Rnf213E9Q555 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Rnf213E9Q555 Gm2756-201ENSMUST00000195851 400 ntBASIC8.61□□□□□ -1.03
Rnf213E9Q555 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC8.61□□□□□ -1.03
Rnf213E9Q555 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Rnf213E9Q555 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Rnf213E9Q555 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Rnf213E9Q555 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Rnf213E9Q555 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Rnf213E9Q555 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Rnf213E9Q555 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Rnf213E9Q555 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Rnf213E9Q555 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
Rnf213E9Q555 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC8.61□□□□□ -1.03
Rnf213E9Q555 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC8.61□□□□□ -1.03
Rnf213E9Q555 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Rnf213E9Q555 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Rnf213E9Q555 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Rnf213E9Q555 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Rnf213E9Q555 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC8.6□□□□□ -1.03
Rnf213E9Q555 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Rnf213E9Q555 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Rnf213E9Q555 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Rnf213E9Q555 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Rnf213E9Q555 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Rnf213E9Q555 Gm7935-201ENSMUST00000100555 1278 ntBASIC8.6□□□□□ -1.03
Rnf213E9Q555 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
Rnf213E9Q555 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Rnf213E9Q555 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Rnf213E9Q555 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Rnf213E9Q555 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Rnf213E9Q555 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
Rnf213E9Q555 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Rnf213E9Q555 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Rnf213E9Q555 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Rnf213E9Q555 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Rnf213E9Q555 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Rnf213E9Q555 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Rnf213E9Q555 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Rnf213E9Q555 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Rnf213E9Q555 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Rnf213E9Q555 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC8.6□□□□□ -1.03
Rnf213E9Q555 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Rnf213E9Q555 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
Rnf213E9Q555 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Rnf213E9Q555 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Rnf213E9Q555 Gm14822-201ENSMUST00000122247 291 ntBASIC8.59□□□□□ -1.03
Rnf213E9Q555 Gm9727-201ENSMUST00000161387 555 ntBASIC8.59□□□□□ -1.03
Rnf213E9Q555 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Rnf213E9Q555 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC8.59□□□□□ -1.03
Rnf213E9Q555 Gm9731-201ENSMUST00000209480 747 ntBASIC8.59□□□□□ -1.03
Rnf213E9Q555 AC108846.1-201ENSMUST00000214531 513 ntBASIC8.59□□□□□ -1.03
Rnf213E9Q555 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Rnf213E9Q555 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Rnf213E9Q555 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Rnf213E9Q555 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Rnf213E9Q555 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Rnf213E9Q555 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Rnf213E9Q555 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Rnf213E9Q555 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC8.59□□□□□ -1.03
Rnf213E9Q555 Gm5264-201ENSMUST00000190584 848 ntBASIC8.59□□□□□ -1.03
Rnf213E9Q555 AC158982.1-201ENSMUST00000228377 901 ntBASIC8.59□□□□□ -1.03
Rnf213E9Q555 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Rnf213E9Q555 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Rnf213E9Q555 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
Rnf213E9Q555 Gm15372-201ENSMUST00000120729 834 ntBASIC8.59□□□□□ -1.03
Rnf213E9Q555 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Rnf213E9Q555 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC8.59□□□□□ -1.03
Rnf213E9Q555 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Rnf213E9Q555 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC8.59□□□□□ -1.03
Rnf213E9Q555 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Rnf213E9Q555 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
Rnf213E9Q555 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
Rnf213E9Q555 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Rnf213E9Q555 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC8.59□□□□□ -1.03
Rnf213E9Q555 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Rnf213E9Q555 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Rnf213E9Q555 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.04
Rnf213E9Q555 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Rnf213E9Q555 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms