Protein–RNA interactions for Protein: E9PZ54

Gcom1, GRINL1A complex locus, mousemouse

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gcom1E9PZ54 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gcom1E9PZ54 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Gcom1E9PZ54 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gcom1E9PZ54 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.45■□□□□ 0.7
Gcom1E9PZ54 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Gcom1E9PZ54 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gcom1E9PZ54 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gcom1E9PZ54 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gcom1E9PZ54 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gcom1E9PZ54 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Gcom1E9PZ54 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Gcom1E9PZ54 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Gcom1E9PZ54 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gcom1E9PZ54 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.44■□□□□ 0.7
Gcom1E9PZ54 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gcom1E9PZ54 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gcom1E9PZ54 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Gcom1E9PZ54 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Gcom1E9PZ54 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gcom1E9PZ54 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Gcom1E9PZ54 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Gcom1E9PZ54 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Gcom1E9PZ54 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.43■□□□□ 0.7
Gcom1E9PZ54 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Gcom1E9PZ54 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gcom1E9PZ54 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gcom1E9PZ54 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gcom1E9PZ54 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gcom1E9PZ54 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
Gcom1E9PZ54 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.43■□□□□ 0.7
Gcom1E9PZ54 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.43■□□□□ 0.7
Gcom1E9PZ54 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
Gcom1E9PZ54 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
Gcom1E9PZ54 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gcom1E9PZ54 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gcom1E9PZ54 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gcom1E9PZ54 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.43■□□□□ 0.7
Gcom1E9PZ54 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Gcom1E9PZ54 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Gcom1E9PZ54 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Gcom1E9PZ54 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gcom1E9PZ54 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gcom1E9PZ54 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gcom1E9PZ54 Gm13146-201ENSMUST00000118508 780 ntBASIC19.42■□□□□ 0.7
Gcom1E9PZ54 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.42■□□□□ 0.7
Gcom1E9PZ54 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Gcom1E9PZ54 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gcom1E9PZ54 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gcom1E9PZ54 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gcom1E9PZ54 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Gcom1E9PZ54 Gm45244-201ENSMUST00000211328 2200 ntBASIC19.41■□□□□ 0.7
Gcom1E9PZ54 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gcom1E9PZ54 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
Gcom1E9PZ54 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC19.41■□□□□ 0.7
Gcom1E9PZ54 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gcom1E9PZ54 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gcom1E9PZ54 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gcom1E9PZ54 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Gcom1E9PZ54 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Gcom1E9PZ54 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Gcom1E9PZ54 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.41■□□□□ 0.7
Gcom1E9PZ54 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Gcom1E9PZ54 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gcom1E9PZ54 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Gcom1E9PZ54 Gm43338-201ENSMUST00000198617 2223 ntBASIC19.41■□□□□ 0.7
Gcom1E9PZ54 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Gcom1E9PZ54 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.41■□□□□ 0.7
Gcom1E9PZ54 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gcom1E9PZ54 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gcom1E9PZ54 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gcom1E9PZ54 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gcom1E9PZ54 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gcom1E9PZ54 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gcom1E9PZ54 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.4■□□□□ 0.7
Gcom1E9PZ54 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.4■□□□□ 0.7
Gcom1E9PZ54 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.4■□□□□ 0.7
Gcom1E9PZ54 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gcom1E9PZ54 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.4■□□□□ 0.7
Gcom1E9PZ54 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gcom1E9PZ54 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Gcom1E9PZ54 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Gcom1E9PZ54 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gcom1E9PZ54 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gcom1E9PZ54 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gcom1E9PZ54 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gcom1E9PZ54 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Gcom1E9PZ54 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Gcom1E9PZ54 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gcom1E9PZ54 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Gcom1E9PZ54 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
Gcom1E9PZ54 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.39■□□□□ 0.69
Gcom1E9PZ54 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
Gcom1E9PZ54 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.39■□□□□ 0.69
Gcom1E9PZ54 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gcom1E9PZ54 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gcom1E9PZ54 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Gcom1E9PZ54 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gcom1E9PZ54 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gcom1E9PZ54 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gcom1E9PZ54 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms