Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh17E9PXF0 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh17E9PXF0 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh17E9PXF0 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh17E9PXF0 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Pcdh17E9PXF0 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh17E9PXF0 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh17E9PXF0 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh17E9PXF0 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh17E9PXF0 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh17E9PXF0 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.46■□□□□ 0.23
Pcdh17E9PXF0 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.46■□□□□ 0.23
Pcdh17E9PXF0 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh17E9PXF0 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh17E9PXF0 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh17E9PXF0 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Pcdh17E9PXF0 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh17E9PXF0 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh17E9PXF0 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh17E9PXF0 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh17E9PXF0 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
Pcdh17E9PXF0 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Pcdh17E9PXF0 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh17E9PXF0 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh17E9PXF0 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh17E9PXF0 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh17E9PXF0 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh17E9PXF0 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh17E9PXF0 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Pcdh17E9PXF0 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.45■□□□□ 0.22
Pcdh17E9PXF0 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh17E9PXF0 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.45■□□□□ 0.22
Pcdh17E9PXF0 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh17E9PXF0 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Pcdh17E9PXF0 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh17E9PXF0 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.45■□□□□ 0.22
Pcdh17E9PXF0 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.45■□□□□ 0.22
Pcdh17E9PXF0 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh17E9PXF0 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.44■□□□□ 0.22
Pcdh17E9PXF0 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh17E9PXF0 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh17E9PXF0 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.44■□□□□ 0.22
Pcdh17E9PXF0 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh17E9PXF0 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.44■□□□□ 0.22
Pcdh17E9PXF0 Gm6433-201ENSMUST00000118634 875 ntBASIC16.44■□□□□ 0.22
Pcdh17E9PXF0 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.44■□□□□ 0.22
Pcdh17E9PXF0 Odf3b-204ENSMUST00000227834 930 ntBASIC16.44■□□□□ 0.22
Pcdh17E9PXF0 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh17E9PXF0 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh17E9PXF0 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh17E9PXF0 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh17E9PXF0 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh17E9PXF0 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh17E9PXF0 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh17E9PXF0 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.44■□□□□ 0.22
Pcdh17E9PXF0 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh17E9PXF0 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.43■□□□□ 0.22
Pcdh17E9PXF0 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh17E9PXF0 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh17E9PXF0 Mir2861-201ENSMUST00000175539 82 ntBASIC16.43■□□□□ 0.22
Pcdh17E9PXF0 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.43■□□□□ 0.22
Pcdh17E9PXF0 Gm30025-201ENSMUST00000218555 728 ntBASIC16.43■□□□□ 0.22
Pcdh17E9PXF0 Timm23-208ENSMUST00000226683 750 ntBASIC16.43■□□□□ 0.22
Pcdh17E9PXF0 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh17E9PXF0 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Pcdh17E9PXF0 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC16.43■□□□□ 0.22
Pcdh17E9PXF0 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh17E9PXF0 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh17E9PXF0 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh17E9PXF0 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.43■□□□□ 0.22
Pcdh17E9PXF0 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh17E9PXF0 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh17E9PXF0 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh17E9PXF0 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.43■□□□□ 0.22
Pcdh17E9PXF0 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh17E9PXF0 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh17E9PXF0 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh17E9PXF0 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.42■□□□□ 0.22
Pcdh17E9PXF0 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh17E9PXF0 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.42■□□□□ 0.22
Pcdh17E9PXF0 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh17E9PXF0 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh17E9PXF0 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh17E9PXF0 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Pcdh17E9PXF0 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh17E9PXF0 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
Pcdh17E9PXF0 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh17E9PXF0 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.42■□□□□ 0.22
Pcdh17E9PXF0 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh17E9PXF0 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh17E9PXF0 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh17E9PXF0 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Pcdh17E9PXF0 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh17E9PXF0 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh17E9PXF0 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Pcdh17E9PXF0 BC021767-201ENSMUST00000126387 1716 ntBASIC16.42■□□□□ 0.22
Pcdh17E9PXF0 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh17E9PXF0 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Pcdh17E9PXF0 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh17E9PXF0 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms