Protein–RNA interactions for Protein: E9PVL6

Trim30b, Tripartite motif-containing 30B, mousemouse

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30bE9PVL6 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim30bE9PVL6 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim30bE9PVL6 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.86■□□□□ 0.61
Trim30bE9PVL6 Gm22697-201ENSMUST00000175194 63 ntBASIC18.86■□□□□ 0.61
Trim30bE9PVL6 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trim30bE9PVL6 Gm6345-202ENSMUST00000180900 204 ntBASIC18.86■□□□□ 0.61
Trim30bE9PVL6 Gm18101-201ENSMUST00000215769 548 ntBASIC18.86■□□□□ 0.61
Trim30bE9PVL6 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim30bE9PVL6 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim30bE9PVL6 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim30bE9PVL6 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim30bE9PVL6 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim30bE9PVL6 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim30bE9PVL6 Iqck-206ENSMUST00000208658 2891 ntBASIC18.86■□□□□ 0.61
Trim30bE9PVL6 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Trim30bE9PVL6 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim30bE9PVL6 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim30bE9PVL6 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Trim30bE9PVL6 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim30bE9PVL6 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim30bE9PVL6 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim30bE9PVL6 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Trim30bE9PVL6 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Trim30bE9PVL6 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim30bE9PVL6 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim30bE9PVL6 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trim30bE9PVL6 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim30bE9PVL6 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.85■□□□□ 0.61
Trim30bE9PVL6 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim30bE9PVL6 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim30bE9PVL6 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim30bE9PVL6 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Trim30bE9PVL6 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim30bE9PVL6 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim30bE9PVL6 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim30bE9PVL6 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim30bE9PVL6 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim30bE9PVL6 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
Trim30bE9PVL6 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.84■□□□□ 0.61
Trim30bE9PVL6 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trim30bE9PVL6 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim30bE9PVL6 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim30bE9PVL6 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim30bE9PVL6 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim30bE9PVL6 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trim30bE9PVL6 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim30bE9PVL6 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim30bE9PVL6 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim30bE9PVL6 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim30bE9PVL6 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim30bE9PVL6 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim30bE9PVL6 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim30bE9PVL6 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim30bE9PVL6 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim30bE9PVL6 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim30bE9PVL6 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trim30bE9PVL6 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Trim30bE9PVL6 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim30bE9PVL6 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim30bE9PVL6 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim30bE9PVL6 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim30bE9PVL6 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim30bE9PVL6 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Trim30bE9PVL6 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim30bE9PVL6 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.83■□□□□ 0.61
Trim30bE9PVL6 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Trim30bE9PVL6 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Trim30bE9PVL6 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Trim30bE9PVL6 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trim30bE9PVL6 Gm16061-201ENSMUST00000122167 857 ntBASIC18.83■□□□□ 0.6
Trim30bE9PVL6 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trim30bE9PVL6 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim30bE9PVL6 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.83■□□□□ 0.6
Trim30bE9PVL6 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
Trim30bE9PVL6 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim30bE9PVL6 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim30bE9PVL6 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trim30bE9PVL6 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.82■□□□□ 0.6
Trim30bE9PVL6 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim30bE9PVL6 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim30bE9PVL6 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim30bE9PVL6 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim30bE9PVL6 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trim30bE9PVL6 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim30bE9PVL6 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Trim30bE9PVL6 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim30bE9PVL6 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim30bE9PVL6 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim30bE9PVL6 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim30bE9PVL6 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trim30bE9PVL6 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
Trim30bE9PVL6 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Trim30bE9PVL6 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim30bE9PVL6 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trim30bE9PVL6 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Trim30bE9PVL6 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim30bE9PVL6 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim30bE9PVL6 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim30bE9PVL6 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Trim30bE9PVL6 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms