Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Shank1D3YZU1 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Shank1D3YZU1 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Shank1D3YZU1 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Shank1D3YZU1 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Shank1D3YZU1 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shank1D3YZU1 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shank1D3YZU1 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shank1D3YZU1 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shank1D3YZU1 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC15.82■□□□□ 0.12
Shank1D3YZU1 Gm18669-201ENSMUST00000216049 778 ntBASIC15.82■□□□□ 0.12
Shank1D3YZU1 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shank1D3YZU1 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shank1D3YZU1 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shank1D3YZU1 Gm15853-202ENSMUST00000195518 2041 ntBASIC15.82■□□□□ 0.12
Shank1D3YZU1 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shank1D3YZU1 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Shank1D3YZU1 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shank1D3YZU1 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Shank1D3YZU1 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Shank1D3YZU1 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Shank1D3YZU1 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shank1D3YZU1 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
Shank1D3YZU1 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC15.81■□□□□ 0.12
Shank1D3YZU1 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC15.81■□□□□ 0.12
Shank1D3YZU1 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Shank1D3YZU1 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shank1D3YZU1 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shank1D3YZU1 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shank1D3YZU1 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC15.81■□□□□ 0.12
Shank1D3YZU1 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Shank1D3YZU1 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shank1D3YZU1 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shank1D3YZU1 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Shank1D3YZU1 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shank1D3YZU1 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Shank1D3YZU1 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shank1D3YZU1 Gm37820-201ENSMUST00000194021 2147 ntBASIC15.81■□□□□ 0.12
Shank1D3YZU1 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shank1D3YZU1 Spsb2-203ENSMUST00000112473 1322 ntBASIC15.81■□□□□ 0.12
Shank1D3YZU1 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shank1D3YZU1 Mir1668-201ENSMUST00000184114 107 ntBASIC15.8■□□□□ 0.12
Shank1D3YZU1 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC15.8■□□□□ 0.12
Shank1D3YZU1 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC15.8■□□□□ 0.12
Shank1D3YZU1 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shank1D3YZU1 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
Shank1D3YZU1 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shank1D3YZU1 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC15.8■□□□□ 0.12
Shank1D3YZU1 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shank1D3YZU1 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shank1D3YZU1 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC15.8■□□□□ 0.12
Shank1D3YZU1 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Shank1D3YZU1 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Shank1D3YZU1 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Shank1D3YZU1 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shank1D3YZU1 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC15.8■□□□□ 0.12
Shank1D3YZU1 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shank1D3YZU1 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Shank1D3YZU1 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shank1D3YZU1 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shank1D3YZU1 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Shank1D3YZU1 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shank1D3YZU1 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shank1D3YZU1 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Shank1D3YZU1 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Shank1D3YZU1 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC15.79■□□□□ 0.12
Shank1D3YZU1 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Shank1D3YZU1 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
Shank1D3YZU1 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shank1D3YZU1 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shank1D3YZU1 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Shank1D3YZU1 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shank1D3YZU1 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shank1D3YZU1 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shank1D3YZU1 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Shank1D3YZU1 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shank1D3YZU1 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.79■□□□□ 0.12
Shank1D3YZU1 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC15.79■□□□□ 0.12
Shank1D3YZU1 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shank1D3YZU1 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shank1D3YZU1 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Shank1D3YZU1 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Shank1D3YZU1 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Shank1D3YZU1 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Shank1D3YZU1 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC15.78■□□□□ 0.12
Shank1D3YZU1 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Shank1D3YZU1 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC15.78■□□□□ 0.12
Shank1D3YZU1 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Shank1D3YZU1 Gm17808-201ENSMUST00000200859 894 ntBASIC15.78■□□□□ 0.12
Shank1D3YZU1 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Shank1D3YZU1 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Shank1D3YZU1 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Shank1D3YZU1 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Shank1D3YZU1 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Shank1D3YZU1 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
Shank1D3YZU1 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Shank1D3YZU1 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Shank1D3YZU1 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Shank1D3YZU1 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Shank1D3YZU1 Gm4974-201ENSMUST00000209974 875 ntBASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms