Protein–RNA interactions for Protein: D3YY23

Lonrf1, LON peptidase N-terminal domain and RING finger protein 1, mousemouse

Predictions only

Length 762 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lonrf1D3YY23 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lonrf1D3YY23 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lonrf1D3YY23 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lonrf1D3YY23 Gm2399-201ENSMUST00000104944 225 ntBASIC18.25■□□□□ 0.51
Lonrf1D3YY23 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.25■□□□□ 0.51
Lonrf1D3YY23 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.25■□□□□ 0.51
Lonrf1D3YY23 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Lonrf1D3YY23 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lonrf1D3YY23 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Lonrf1D3YY23 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lonrf1D3YY23 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lonrf1D3YY23 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lonrf1D3YY23 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lonrf1D3YY23 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.25■□□□□ 0.51
Lonrf1D3YY23 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lonrf1D3YY23 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lonrf1D3YY23 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lonrf1D3YY23 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lonrf1D3YY23 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lonrf1D3YY23 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Lonrf1D3YY23 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lonrf1D3YY23 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.24■□□□□ 0.51
Lonrf1D3YY23 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lonrf1D3YY23 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lonrf1D3YY23 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Lonrf1D3YY23 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.24■□□□□ 0.51
Lonrf1D3YY23 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.51
Lonrf1D3YY23 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Lonrf1D3YY23 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lonrf1D3YY23 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lonrf1D3YY23 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lonrf1D3YY23 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Lonrf1D3YY23 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Lonrf1D3YY23 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.24■□□□□ 0.51
Lonrf1D3YY23 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lonrf1D3YY23 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lonrf1D3YY23 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Lonrf1D3YY23 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lonrf1D3YY23 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
Lonrf1D3YY23 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Lonrf1D3YY23 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Lonrf1D3YY23 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.23■□□□□ 0.51
Lonrf1D3YY23 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Lonrf1D3YY23 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lonrf1D3YY23 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lonrf1D3YY23 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lonrf1D3YY23 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lonrf1D3YY23 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lonrf1D3YY23 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lonrf1D3YY23 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Lonrf1D3YY23 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lonrf1D3YY23 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Lonrf1D3YY23 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lonrf1D3YY23 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lonrf1D3YY23 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.22■□□□□ 0.51
Lonrf1D3YY23 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lonrf1D3YY23 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lonrf1D3YY23 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lonrf1D3YY23 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Lonrf1D3YY23 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.22■□□□□ 0.51
Lonrf1D3YY23 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lonrf1D3YY23 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Lonrf1D3YY23 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lonrf1D3YY23 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lonrf1D3YY23 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lonrf1D3YY23 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Lonrf1D3YY23 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.22■□□□□ 0.51
Lonrf1D3YY23 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lonrf1D3YY23 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Lonrf1D3YY23 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Lonrf1D3YY23 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Lonrf1D3YY23 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Lonrf1D3YY23 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.21■□□□□ 0.51
Lonrf1D3YY23 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Lonrf1D3YY23 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lonrf1D3YY23 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Lonrf1D3YY23 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lonrf1D3YY23 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.21■□□□□ 0.51
Lonrf1D3YY23 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lonrf1D3YY23 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Lonrf1D3YY23 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.21■□□□□ 0.51
Lonrf1D3YY23 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Lonrf1D3YY23 Gm44549-201ENSMUST00000208351 577 ntBASIC18.21■□□□□ 0.51
Lonrf1D3YY23 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Lonrf1D3YY23 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lonrf1D3YY23 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Lonrf1D3YY23 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Lonrf1D3YY23 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.21■□□□□ 0.51
Lonrf1D3YY23 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Lonrf1D3YY23 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lonrf1D3YY23 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.21■□□□□ 0.51
Lonrf1D3YY23 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lonrf1D3YY23 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.21■□□□□ 0.5
Lonrf1D3YY23 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Lonrf1D3YY23 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lonrf1D3YY23 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lonrf1D3YY23 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.2■□□□□ 0.5
Lonrf1D3YY23 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lonrf1D3YY23 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lonrf1D3YY23 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 795.1 ms