Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC19.33■□□□□ 0.68
Trim30cD3YVI9 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim30cD3YVI9 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trim30cD3YVI9 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim30cD3YVI9 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim30cD3YVI9 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim30cD3YVI9 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trim30cD3YVI9 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim30cD3YVI9 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.32■□□□□ 0.68
Trim30cD3YVI9 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim30cD3YVI9 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Trim30cD3YVI9 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim30cD3YVI9 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Trim30cD3YVI9 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim30cD3YVI9 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim30cD3YVI9 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim30cD3YVI9 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim30cD3YVI9 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.32■□□□□ 0.68
Trim30cD3YVI9 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim30cD3YVI9 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Trim30cD3YVI9 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trim30cD3YVI9 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim30cD3YVI9 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim30cD3YVI9 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim30cD3YVI9 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Trim30cD3YVI9 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trim30cD3YVI9 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim30cD3YVI9 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim30cD3YVI9 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim30cD3YVI9 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trim30cD3YVI9 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trim30cD3YVI9 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Trim30cD3YVI9 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim30cD3YVI9 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim30cD3YVI9 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim30cD3YVI9 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim30cD3YVI9 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC19.31■□□□□ 0.68
Trim30cD3YVI9 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Trim30cD3YVI9 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim30cD3YVI9 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim30cD3YVI9 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trim30cD3YVI9 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim30cD3YVI9 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim30cD3YVI9 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim30cD3YVI9 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim30cD3YVI9 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim30cD3YVI9 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim30cD3YVI9 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim30cD3YVI9 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trim30cD3YVI9 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.3■□□□□ 0.68
Trim30cD3YVI9 Gm5408-201ENSMUST00000197998 747 ntBASIC19.3■□□□□ 0.68
Trim30cD3YVI9 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim30cD3YVI9 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim30cD3YVI9 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim30cD3YVI9 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Trim30cD3YVI9 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.3■□□□□ 0.68
Trim30cD3YVI9 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim30cD3YVI9 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim30cD3YVI9 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim30cD3YVI9 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Trim30cD3YVI9 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim30cD3YVI9 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim30cD3YVI9 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim30cD3YVI9 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trim30cD3YVI9 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Trim30cD3YVI9 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.29■□□□□ 0.68
Trim30cD3YVI9 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim30cD3YVI9 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim30cD3YVI9 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim30cD3YVI9 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.29■□□□□ 0.68
Trim30cD3YVI9 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim30cD3YVI9 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim30cD3YVI9 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC19.29■□□□□ 0.68
Trim30cD3YVI9 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim30cD3YVI9 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.29■□□□□ 0.68
Trim30cD3YVI9 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trim30cD3YVI9 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trim30cD3YVI9 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim30cD3YVI9 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim30cD3YVI9 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trim30cD3YVI9 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim30cD3YVI9 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trim30cD3YVI9 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trim30cD3YVI9 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.28■□□□□ 0.68
Trim30cD3YVI9 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Trim30cD3YVI9 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim30cD3YVI9 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Trim30cD3YVI9 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Trim30cD3YVI9 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
Trim30cD3YVI9 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim30cD3YVI9 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
Trim30cD3YVI9 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.27■□□□□ 0.68
Trim30cD3YVI9 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim30cD3YVI9 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC19.27■□□□□ 0.68
Trim30cD3YVI9 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim30cD3YVI9 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim30cD3YVI9 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim30cD3YVI9 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim30cD3YVI9 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Trim30cD3YVI9 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms