Protein–RNA interactions for Protein: D3YUK0

Gm3259, Predicted gene 3259, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3259D3YUK0 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm3259D3YUK0 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm3259D3YUK0 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.73■□□□□ 0.43
Gm3259D3YUK0 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm3259D3YUK0 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Gm3259D3YUK0 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm3259D3YUK0 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm3259D3YUK0 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Gm3259D3YUK0 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm3259D3YUK0 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm3259D3YUK0 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm3259D3YUK0 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm3259D3YUK0 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm3259D3YUK0 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm3259D3YUK0 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm3259D3YUK0 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.72■□□□□ 0.43
Gm3259D3YUK0 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm3259D3YUK0 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm3259D3YUK0 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.72■□□□□ 0.43
Gm3259D3YUK0 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Gm3259D3YUK0 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm3259D3YUK0 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Gm3259D3YUK0 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm3259D3YUK0 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm3259D3YUK0 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm3259D3YUK0 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Gm3259D3YUK0 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Gm3259D3YUK0 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm3259D3YUK0 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm3259D3YUK0 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Gm3259D3YUK0 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Gm3259D3YUK0 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Gm3259D3YUK0 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm3259D3YUK0 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm3259D3YUK0 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm3259D3YUK0 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.71■□□□□ 0.43
Gm3259D3YUK0 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm3259D3YUK0 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Gm3259D3YUK0 Gm10138-203ENSMUST00000206952 366 ntBASIC17.71■□□□□ 0.43
Gm3259D3YUK0 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm3259D3YUK0 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.71■□□□□ 0.43
Gm3259D3YUK0 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Gm3259D3YUK0 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
Gm3259D3YUK0 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Gm3259D3YUK0 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Gm3259D3YUK0 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.71■□□□□ 0.42
Gm3259D3YUK0 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Gm3259D3YUK0 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm3259D3YUK0 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Gm3259D3YUK0 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm3259D3YUK0 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Gm3259D3YUK0 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
Gm3259D3YUK0 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm3259D3YUK0 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.7■□□□□ 0.42
Gm3259D3YUK0 Gm11249-201ENSMUST00000117071 859 ntBASIC17.7■□□□□ 0.42
Gm3259D3YUK0 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.7■□□□□ 0.42
Gm3259D3YUK0 Mir6349-201ENSMUST00000184059 97 ntBASIC17.7■□□□□ 0.42
Gm3259D3YUK0 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.7■□□□□ 0.42
Gm3259D3YUK0 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.7■□□□□ 0.42
Gm3259D3YUK0 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm3259D3YUK0 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm3259D3YUK0 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm3259D3YUK0 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Gm3259D3YUK0 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Gm3259D3YUK0 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Gm3259D3YUK0 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm3259D3YUK0 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm3259D3YUK0 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm3259D3YUK0 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Gm3259D3YUK0 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Gm3259D3YUK0 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm3259D3YUK0 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm3259D3YUK0 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Gm3259D3YUK0 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm3259D3YUK0 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Gm3259D3YUK0 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm3259D3YUK0 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm3259D3YUK0 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
Gm3259D3YUK0 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.69■□□□□ 0.42
Gm3259D3YUK0 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Gm3259D3YUK0 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm3259D3YUK0 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.69■□□□□ 0.42
Gm3259D3YUK0 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm3259D3YUK0 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm3259D3YUK0 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.68■□□□□ 0.42
Gm3259D3YUK0 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm3259D3YUK0 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm3259D3YUK0 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Gm3259D3YUK0 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm3259D3YUK0 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm3259D3YUK0 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm3259D3YUK0 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.68■□□□□ 0.42
Gm3259D3YUK0 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm3259D3YUK0 Gm12441-201ENSMUST00000121806 588 ntBASIC17.68■□□□□ 0.42
Gm3259D3YUK0 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.68■□□□□ 0.42
Gm3259D3YUK0 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.68■□□□□ 0.42
Gm3259D3YUK0 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm3259D3YUK0 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm3259D3YUK0 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm3259D3YUK0 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms