Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.75■□□□□ 0.59
Rfx8D3YU81 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rfx8D3YU81 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Rfx8D3YU81 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rfx8D3YU81 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rfx8D3YU81 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rfx8D3YU81 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rfx8D3YU81 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.75■□□□□ 0.59
Rfx8D3YU81 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rfx8D3YU81 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rfx8D3YU81 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rfx8D3YU81 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rfx8D3YU81 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rfx8D3YU81 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rfx8D3YU81 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rfx8D3YU81 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
Rfx8D3YU81 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.74■□□□□ 0.59
Rfx8D3YU81 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rfx8D3YU81 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.74■□□□□ 0.59
Rfx8D3YU81 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.74■□□□□ 0.59
Rfx8D3YU81 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rfx8D3YU81 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.74■□□□□ 0.59
Rfx8D3YU81 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.74■□□□□ 0.59
Rfx8D3YU81 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.74■□□□□ 0.59
Rfx8D3YU81 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Rfx8D3YU81 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rfx8D3YU81 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
Rfx8D3YU81 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rfx8D3YU81 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rfx8D3YU81 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rfx8D3YU81 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rfx8D3YU81 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rfx8D3YU81 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rfx8D3YU81 Mir6349-201ENSMUST00000184059 97 ntBASIC18.73■□□□□ 0.59
Rfx8D3YU81 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
Rfx8D3YU81 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rfx8D3YU81 Mtag2-201ENSMUST00000058665 714 ntBASIC18.73■□□□□ 0.59
Rfx8D3YU81 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rfx8D3YU81 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Rfx8D3YU81 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rfx8D3YU81 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rfx8D3YU81 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Rfx8D3YU81 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rfx8D3YU81 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rfx8D3YU81 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rfx8D3YU81 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Rfx8D3YU81 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rfx8D3YU81 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Rfx8D3YU81 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Rfx8D3YU81 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.72■□□□□ 0.59
Rfx8D3YU81 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Rfx8D3YU81 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rfx8D3YU81 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.72■□□□□ 0.59
Rfx8D3YU81 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Rfx8D3YU81 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rfx8D3YU81 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Rfx8D3YU81 Gm15375-201ENSMUST00000119510 849 ntBASIC18.71■□□□□ 0.59
Rfx8D3YU81 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.71■□□□□ 0.59
Rfx8D3YU81 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rfx8D3YU81 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rfx8D3YU81 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rfx8D3YU81 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rfx8D3YU81 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rfx8D3YU81 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rfx8D3YU81 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.71■□□□□ 0.59
Rfx8D3YU81 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rfx8D3YU81 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
Rfx8D3YU81 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfx8D3YU81 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rfx8D3YU81 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rfx8D3YU81 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfx8D3YU81 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfx8D3YU81 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.7■□□□□ 0.58
Rfx8D3YU81 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rfx8D3YU81 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rfx8D3YU81 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rfx8D3YU81 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rfx8D3YU81 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.7■□□□□ 0.58
Rfx8D3YU81 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfx8D3YU81 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rfx8D3YU81 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rfx8D3YU81 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfx8D3YU81 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rfx8D3YU81 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.69■□□□□ 0.58
Rfx8D3YU81 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfx8D3YU81 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.69■□□□□ 0.58
Rfx8D3YU81 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rfx8D3YU81 Gm8520-201ENSMUST00000186517 868 ntBASIC18.69■□□□□ 0.58
Rfx8D3YU81 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rfx8D3YU81 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.69■□□□□ 0.58
Rfx8D3YU81 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfx8D3YU81 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfx8D3YU81 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfx8D3YU81 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfx8D3YU81 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfx8D3YU81 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.69■□□□□ 0.58
Rfx8D3YU81 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.69■□□□□ 0.58
Rfx8D3YU81 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rfx8D3YU81 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rfx8D3YU81 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms