Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Syce3B5KM66 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Syce3B5KM66 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Syce3B5KM66 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Syce3B5KM66 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Syce3B5KM66 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Syce3B5KM66 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Syce3B5KM66 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Syce3B5KM66 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
Syce3B5KM66 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC20.3■□□□□ 0.84
Syce3B5KM66 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC20.3■□□□□ 0.84
Syce3B5KM66 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Syce3B5KM66 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Syce3B5KM66 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Syce3B5KM66 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Syce3B5KM66 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Syce3B5KM66 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Syce3B5KM66 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Syce3B5KM66 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Syce3B5KM66 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Syce3B5KM66 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Syce3B5KM66 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Syce3B5KM66 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Syce3B5KM66 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC20.29■□□□□ 0.84
Syce3B5KM66 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Syce3B5KM66 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Syce3B5KM66 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Syce3B5KM66 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Syce3B5KM66 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.29■□□□□ 0.84
Syce3B5KM66 Gm21956-201ENSMUST00000179946 522 ntBASIC20.29■□□□□ 0.84
Syce3B5KM66 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Syce3B5KM66 Haglr-201ENSMUST00000100000 2085 ntBASIC20.29■□□□□ 0.84
Syce3B5KM66 Gm20628-201ENSMUST00000177363 3215 ntBASIC20.29■□□□□ 0.84
Syce3B5KM66 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
Syce3B5KM66 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Syce3B5KM66 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Syce3B5KM66 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
Syce3B5KM66 Gm26917-202ENSMUST00000192833 3329 ntBASIC20.29■□□□□ 0.84
Syce3B5KM66 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Syce3B5KM66 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Syce3B5KM66 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Syce3B5KM66 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Syce3B5KM66 Gm44544-201ENSMUST00000207052 1844 ntBASIC20.28■□□□□ 0.84
Syce3B5KM66 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
Syce3B5KM66 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Syce3B5KM66 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Syce3B5KM66 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Syce3B5KM66 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Syce3B5KM66 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Syce3B5KM66 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Syce3B5KM66 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Syce3B5KM66 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Syce3B5KM66 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Syce3B5KM66 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Syce3B5KM66 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
Syce3B5KM66 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC20.27■□□□□ 0.84
Syce3B5KM66 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Syce3B5KM66 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Syce3B5KM66 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
Syce3B5KM66 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
Syce3B5KM66 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.27■□□□□ 0.84
Syce3B5KM66 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Syce3B5KM66 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Syce3B5KM66 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Syce3B5KM66 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Syce3B5KM66 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Syce3B5KM66 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Syce3B5KM66 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Syce3B5KM66 Gm37563-201ENSMUST00000192580 1513 ntBASIC20.27■□□□□ 0.83
Syce3B5KM66 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Syce3B5KM66 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Syce3B5KM66 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.26■□□□□ 0.83
Syce3B5KM66 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Syce3B5KM66 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Syce3B5KM66 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Syce3B5KM66 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
Syce3B5KM66 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Syce3B5KM66 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Syce3B5KM66 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Syce3B5KM66 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Syce3B5KM66 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Syce3B5KM66 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Syce3B5KM66 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Syce3B5KM66 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Syce3B5KM66 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
Syce3B5KM66 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Syce3B5KM66 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Syce3B5KM66 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Syce3B5KM66 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Syce3B5KM66 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Syce3B5KM66 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Syce3B5KM66 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Syce3B5KM66 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Syce3B5KM66 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Syce3B5KM66 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Syce3B5KM66 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Syce3B5KM66 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Syce3B5KM66 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Syce3B5KM66 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC20.24■□□□□ 0.83
Syce3B5KM66 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms