Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm12887B1AVM1 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm12887B1AVM1 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Gm12887B1AVM1 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm12887B1AVM1 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm12887B1AVM1 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Gm12887B1AVM1 Gm14117-201ENSMUST00000122417 843 ntBASIC14.37□□□□□ -0.11
Gm12887B1AVM1 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC14.37□□□□□ -0.11
Gm12887B1AVM1 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm12887B1AVM1 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm12887B1AVM1 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC14.37□□□□□ -0.11
Gm12887B1AVM1 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm12887B1AVM1 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Gm12887B1AVM1 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm12887B1AVM1 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm12887B1AVM1 Gm45774-201ENSMUST00000211992 2665 ntBASIC14.37□□□□□ -0.11
Gm12887B1AVM1 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm12887B1AVM1 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm12887B1AVM1 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm12887B1AVM1 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gm12887B1AVM1 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm12887B1AVM1 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm12887B1AVM1 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm12887B1AVM1 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gm12887B1AVM1 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm12887B1AVM1 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm12887B1AVM1 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gm12887B1AVM1 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm12887B1AVM1 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Gm12887B1AVM1 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC14.36□□□□□ -0.11
Gm12887B1AVM1 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm12887B1AVM1 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm12887B1AVM1 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Gm12887B1AVM1 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Gm12887B1AVM1 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm12887B1AVM1 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC14.36□□□□□ -0.11
Gm12887B1AVM1 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm12887B1AVM1 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm12887B1AVM1 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm12887B1AVM1 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gm12887B1AVM1 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm12887B1AVM1 Gm38345-201ENSMUST00000192635 1748 ntBASIC14.35□□□□□ -0.11
Gm12887B1AVM1 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm12887B1AVM1 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gm12887B1AVM1 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Gm12887B1AVM1 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Gm12887B1AVM1 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC14.35□□□□□ -0.11
Gm12887B1AVM1 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm12887B1AVM1 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Gm12887B1AVM1 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm12887B1AVM1 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm12887B1AVM1 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm12887B1AVM1 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm12887B1AVM1 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Gm12887B1AVM1 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm12887B1AVM1 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Gm12887B1AVM1 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm12887B1AVM1 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Gm12887B1AVM1 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm12887B1AVM1 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm12887B1AVM1 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gm12887B1AVM1 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm12887B1AVM1 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gm12887B1AVM1 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm12887B1AVM1 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Gm12887B1AVM1 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC14.34□□□□□ -0.11
Gm12887B1AVM1 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm12887B1AVM1 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Gm12887B1AVM1 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Gm12887B1AVM1 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC14.34□□□□□ -0.11
Gm12887B1AVM1 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC14.34□□□□□ -0.11
Gm12887B1AVM1 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm12887B1AVM1 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC14.34□□□□□ -0.11
Gm12887B1AVM1 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm12887B1AVM1 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm12887B1AVM1 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm12887B1AVM1 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm12887B1AVM1 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC14.34□□□□□ -0.11
Gm12887B1AVM1 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm12887B1AVM1 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Gm12887B1AVM1 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Gm12887B1AVM1 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Gm12887B1AVM1 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Gm12887B1AVM1 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Gm12887B1AVM1 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Gm12887B1AVM1 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Gm12887B1AVM1 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Gm12887B1AVM1 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Gm12887B1AVM1 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm12887B1AVM1 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm12887B1AVM1 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Gm12887B1AVM1 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm12887B1AVM1 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC14.33□□□□□ -0.12
Gm12887B1AVM1 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.33□□□□□ -0.12
Gm12887B1AVM1 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm12887B1AVM1 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Gm12887B1AVM1 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm12887B1AVM1 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC14.33□□□□□ -0.12
Gm12887B1AVM1 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC14.33□□□□□ -0.12
Gm12887B1AVM1 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms