Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.41□□□□□ -0.26
Col6a5A6H584 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC13.41□□□□□ -0.26
Col6a5A6H584 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col6a5A6H584 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col6a5A6H584 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col6a5A6H584 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col6a5A6H584 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col6a5A6H584 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col6a5A6H584 Gm11779-201ENSMUST00000118541 368 ntBASIC13.41□□□□□ -0.26
Col6a5A6H584 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC13.41□□□□□ -0.26
Col6a5A6H584 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col6a5A6H584 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC13.41□□□□□ -0.26
Col6a5A6H584 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC13.41□□□□□ -0.26
Col6a5A6H584 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col6a5A6H584 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col6a5A6H584 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a5A6H584 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC13.4□□□□□ -0.26
Col6a5A6H584 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a5A6H584 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a5A6H584 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a5A6H584 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC13.4□□□□□ -0.26
Col6a5A6H584 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a5A6H584 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Col6a5A6H584 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC13.4□□□□□ -0.26
Col6a5A6H584 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a5A6H584 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a5A6H584 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a5A6H584 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Col6a5A6H584 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a5A6H584 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a5A6H584 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a5A6H584 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a5A6H584 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a5A6H584 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC13.39□□□□□ -0.27
Col6a5A6H584 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Col6a5A6H584 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a5A6H584 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Col6a5A6H584 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a5A6H584 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a5A6H584 Il3ra-202ENSMUST00000223589 738 ntBASIC13.39□□□□□ -0.27
Col6a5A6H584 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a5A6H584 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a5A6H584 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC13.39□□□□□ -0.27
Col6a5A6H584 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a5A6H584 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a5A6H584 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a5A6H584 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a5A6H584 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC13.39□□□□□ -0.27
Col6a5A6H584 Gm4995-201ENSMUST00000117247 432 ntBASIC13.39□□□□□ -0.27
Col6a5A6H584 Gm15920-201ENSMUST00000118998 402 ntBASIC13.39□□□□□ -0.27
Col6a5A6H584 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC13.39□□□□□ -0.27
Col6a5A6H584 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC13.39□□□□□ -0.27
Col6a5A6H584 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Col6a5A6H584 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a5A6H584 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a5A6H584 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Col6a5A6H584 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a5A6H584 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a5A6H584 Gm13401-201ENSMUST00000117074 291 ntBASIC13.38□□□□□ -0.27
Col6a5A6H584 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a5A6H584 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC13.38□□□□□ -0.27
Col6a5A6H584 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC13.38□□□□□ -0.27
Col6a5A6H584 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC13.38□□□□□ -0.27
Col6a5A6H584 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a5A6H584 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a5A6H584 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Col6a5A6H584 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a5A6H584 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a5A6H584 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a5A6H584 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a5A6H584 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Col6a5A6H584 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.38□□□□□ -0.27
Col6a5A6H584 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.38□□□□□ -0.27
Col6a5A6H584 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC13.37□□□□□ -0.27
Col6a5A6H584 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a5A6H584 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Col6a5A6H584 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a5A6H584 Gm24513-201ENSMUST00000174964 138 ntBASIC13.37□□□□□ -0.27
Col6a5A6H584 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Col6a5A6H584 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC13.37□□□□□ -0.27
Col6a5A6H584 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a5A6H584 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a5A6H584 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a5A6H584 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Col6a5A6H584 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a5A6H584 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a5A6H584 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC13.37□□□□□ -0.27
Col6a5A6H584 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC13.37□□□□□ -0.27
Col6a5A6H584 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a5A6H584 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.37□□□□□ -0.27
Col6a5A6H584 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC13.37□□□□□ -0.27
Col6a5A6H584 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Col6a5A6H584 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a5A6H584 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Col6a5A6H584 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Col6a5A6H584 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a5A6H584 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a5A6H584 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a5A6H584 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a5A6H584 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms