Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Scn3aA2ASI5 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Scn3aA2ASI5 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Scn3aA2ASI5 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Scn3aA2ASI5 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Scn3aA2ASI5 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Scn3aA2ASI5 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Scn3aA2ASI5 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC19.83■□□□□ 0.77
Scn3aA2ASI5 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Scn3aA2ASI5 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Scn3aA2ASI5 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Scn3aA2ASI5 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Scn3aA2ASI5 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC19.83■□□□□ 0.76
Scn3aA2ASI5 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Scn3aA2ASI5 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Scn3aA2ASI5 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.83■□□□□ 0.76
Scn3aA2ASI5 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Scn3aA2ASI5 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC19.82■□□□□ 0.76
Scn3aA2ASI5 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Scn3aA2ASI5 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC19.82■□□□□ 0.76
Scn3aA2ASI5 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scn3aA2ASI5 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Scn3aA2ASI5 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC19.82■□□□□ 0.76
Scn3aA2ASI5 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Scn3aA2ASI5 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scn3aA2ASI5 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Scn3aA2ASI5 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scn3aA2ASI5 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Scn3aA2ASI5 Gm18101-201ENSMUST00000215769 548 ntBASIC19.82■□□□□ 0.76
Scn3aA2ASI5 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scn3aA2ASI5 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scn3aA2ASI5 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC19.82■□□□□ 0.76
Scn3aA2ASI5 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Scn3aA2ASI5 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scn3aA2ASI5 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scn3aA2ASI5 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Scn3aA2ASI5 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scn3aA2ASI5 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Scn3aA2ASI5 Gm6345-202ENSMUST00000180900 204 ntBASIC19.81■□□□□ 0.76
Scn3aA2ASI5 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Scn3aA2ASI5 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Scn3aA2ASI5 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scn3aA2ASI5 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scn3aA2ASI5 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Scn3aA2ASI5 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scn3aA2ASI5 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scn3aA2ASI5 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Scn3aA2ASI5 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scn3aA2ASI5 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Scn3aA2ASI5 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Scn3aA2ASI5 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Scn3aA2ASI5 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Scn3aA2ASI5 Gm17661-201ENSMUST00000170317 270 ntBASIC19.8■□□□□ 0.76
Scn3aA2ASI5 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scn3aA2ASI5 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scn3aA2ASI5 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scn3aA2ASI5 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Scn3aA2ASI5 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scn3aA2ASI5 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Scn3aA2ASI5 Gm18958-201ENSMUST00000174258 762 ntBASIC19.79■□□□□ 0.76
Scn3aA2ASI5 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC19.79■□□□□ 0.76
Scn3aA2ASI5 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scn3aA2ASI5 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scn3aA2ASI5 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scn3aA2ASI5 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scn3aA2ASI5 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Scn3aA2ASI5 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Scn3aA2ASI5 Il3ra-202ENSMUST00000223589 738 ntBASIC19.78■□□□□ 0.76
Scn3aA2ASI5 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scn3aA2ASI5 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scn3aA2ASI5 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Scn3aA2ASI5 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scn3aA2ASI5 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Scn3aA2ASI5 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scn3aA2ASI5 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Scn3aA2ASI5 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Scn3aA2ASI5 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
Scn3aA2ASI5 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC19.78■□□□□ 0.76
Scn3aA2ASI5 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scn3aA2ASI5 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
Scn3aA2ASI5 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scn3aA2ASI5 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Scn3aA2ASI5 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scn3aA2ASI5 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scn3aA2ASI5 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC19.77■□□□□ 0.76
Scn3aA2ASI5 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Scn3aA2ASI5 Gm7367-201ENSMUST00000057611 492 ntBASIC19.77■□□□□ 0.76
Scn3aA2ASI5 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scn3aA2ASI5 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scn3aA2ASI5 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scn3aA2ASI5 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scn3aA2ASI5 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scn3aA2ASI5 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.77■□□□□ 0.75
Scn3aA2ASI5 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Scn3aA2ASI5 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.77■□□□□ 0.75
Scn3aA2ASI5 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Scn3aA2ASI5 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Scn3aA2ASI5 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Scn3aA2ASI5 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Scn3aA2ASI5 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms