Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav12d-1A0N8R0 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav12d-1A0N8R0 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav12d-1A0N8R0 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav12d-1A0N8R0 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav12d-1A0N8R0 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav12d-1A0N8R0 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav12d-1A0N8R0 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav12d-1A0N8R0 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC14.28□□□□□ -0.12
Trav12d-1A0N8R0 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav12d-1A0N8R0 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav12d-1A0N8R0 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav12d-1A0N8R0 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav12d-1A0N8R0 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav12d-1A0N8R0 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav12d-1A0N8R0 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav12d-1A0N8R0 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav12d-1A0N8R0 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav12d-1A0N8R0 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav12d-1A0N8R0 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trav12d-1A0N8R0 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav12d-1A0N8R0 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav12d-1A0N8R0 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav12d-1A0N8R0 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav12d-1A0N8R0 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC14.27□□□□□ -0.13
Trav12d-1A0N8R0 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav12d-1A0N8R0 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC14.27□□□□□ -0.13
Trav12d-1A0N8R0 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC14.27□□□□□ -0.13
Trav12d-1A0N8R0 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Trav12d-1A0N8R0 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav12d-1A0N8R0 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav12d-1A0N8R0 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav12d-1A0N8R0 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav12d-1A0N8R0 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav12d-1A0N8R0 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Trav12d-1A0N8R0 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav12d-1A0N8R0 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav12d-1A0N8R0 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav12d-1A0N8R0 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav12d-1A0N8R0 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav12d-1A0N8R0 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav12d-1A0N8R0 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav12d-1A0N8R0 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav12d-1A0N8R0 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav12d-1A0N8R0 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav12d-1A0N8R0 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trav12d-1A0N8R0 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav12d-1A0N8R0 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC14.26□□□□□ -0.13
Trav12d-1A0N8R0 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Trav12d-1A0N8R0 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Trav12d-1A0N8R0 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav12d-1A0N8R0 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav12d-1A0N8R0 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC14.26□□□□□ -0.13
Trav12d-1A0N8R0 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav12d-1A0N8R0 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC14.26□□□□□ -0.13
Trav12d-1A0N8R0 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trav12d-1A0N8R0 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav12d-1A0N8R0 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav12d-1A0N8R0 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav12d-1A0N8R0 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trav12d-1A0N8R0 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.25□□□□□ -0.13
Trav12d-1A0N8R0 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav12d-1A0N8R0 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav12d-1A0N8R0 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav12d-1A0N8R0 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav12d-1A0N8R0 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav12d-1A0N8R0 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trav12d-1A0N8R0 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav12d-1A0N8R0 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav12d-1A0N8R0 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC14.25□□□□□ -0.13
Trav12d-1A0N8R0 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav12d-1A0N8R0 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav12d-1A0N8R0 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trav12d-1A0N8R0 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav12d-1A0N8R0 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.25□□□□□ -0.13
Trav12d-1A0N8R0 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav12d-1A0N8R0 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav12d-1A0N8R0 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav12d-1A0N8R0 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav12d-1A0N8R0 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav12d-1A0N8R0 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav12d-1A0N8R0 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav12d-1A0N8R0 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav12d-1A0N8R0 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav12d-1A0N8R0 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav12d-1A0N8R0 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav12d-1A0N8R0 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav12d-1A0N8R0 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC14.24□□□□□ -0.13
Trav12d-1A0N8R0 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav12d-1A0N8R0 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC14.24□□□□□ -0.13
Trav12d-1A0N8R0 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC14.24□□□□□ -0.13
Trav12d-1A0N8R0 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav12d-1A0N8R0 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav12d-1A0N8R0 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav12d-1A0N8R0 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav12d-1A0N8R0 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Trav12d-1A0N8R0 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Trav12d-1A0N8R0 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.24□□□□□ -0.13
Trav12d-1A0N8R0 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Trav12d-1A0N8R0 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms