Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC20.23■□□□□ 0.83
Ccdc112A0AUP1 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc112A0AUP1 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc112A0AUP1 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc112A0AUP1 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc112A0AUP1 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc112A0AUP1 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc112A0AUP1 Gm10849-201ENSMUST00000100397 618 ntBASIC20.22■□□□□ 0.83
Ccdc112A0AUP1 Gm7290-201ENSMUST00000104990 617 ntBASIC20.22■□□□□ 0.83
Ccdc112A0AUP1 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc112A0AUP1 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Ccdc112A0AUP1 Gm12918-201ENSMUST00000120234 636 ntBASIC20.22■□□□□ 0.83
Ccdc112A0AUP1 Gm15710-201ENSMUST00000121821 636 ntBASIC20.22■□□□□ 0.83
Ccdc112A0AUP1 Gm5075-201ENSMUST00000196916 622 ntBASIC20.22■□□□□ 0.83
Ccdc112A0AUP1 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc112A0AUP1 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.22■□□□□ 0.83
Ccdc112A0AUP1 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.22■□□□□ 0.83
Ccdc112A0AUP1 Gm43294-201ENSMUST00000202850 2490 ntBASIC20.22■□□□□ 0.83
Ccdc112A0AUP1 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc112A0AUP1 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc112A0AUP1 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc112A0AUP1 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc112A0AUP1 Gm37519-201ENSMUST00000191687 2210 ntBASIC20.22■□□□□ 0.83
Ccdc112A0AUP1 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc112A0AUP1 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc112A0AUP1 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc112A0AUP1 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc112A0AUP1 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC20.21■□□□□ 0.83
Ccdc112A0AUP1 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc112A0AUP1 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc112A0AUP1 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc112A0AUP1 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc112A0AUP1 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC20.21■□□□□ 0.83
Ccdc112A0AUP1 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc112A0AUP1 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc112A0AUP1 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc112A0AUP1 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Ccdc112A0AUP1 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc112A0AUP1 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc112A0AUP1 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc112A0AUP1 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc112A0AUP1 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc112A0AUP1 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc112A0AUP1 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc112A0AUP1 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc112A0AUP1 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Ccdc112A0AUP1 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc112A0AUP1 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Ccdc112A0AUP1 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC20.2■□□□□ 0.82
Ccdc112A0AUP1 Gm6211-202ENSMUST00000167849 925 ntBASIC20.2■□□□□ 0.82
Ccdc112A0AUP1 Gm26571-201ENSMUST00000181399 666 ntBASIC20.2■□□□□ 0.82
Ccdc112A0AUP1 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.2■□□□□ 0.82
Ccdc112A0AUP1 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc112A0AUP1 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc112A0AUP1 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc112A0AUP1 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC20.2■□□□□ 0.82
Ccdc112A0AUP1 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc112A0AUP1 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc112A0AUP1 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc112A0AUP1 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc112A0AUP1 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc112A0AUP1 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc112A0AUP1 Gm43338-201ENSMUST00000198617 2223 ntBASIC20.19■□□□□ 0.82
Ccdc112A0AUP1 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc112A0AUP1 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc112A0AUP1 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc112A0AUP1 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc112A0AUP1 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC20.19■□□□□ 0.82
Ccdc112A0AUP1 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc112A0AUP1 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc112A0AUP1 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc112A0AUP1 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc112A0AUP1 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Ccdc112A0AUP1 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc112A0AUP1 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc112A0AUP1 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc112A0AUP1 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Ccdc112A0AUP1 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc112A0AUP1 Gm2399-201ENSMUST00000104944 225 ntBASIC20.18■□□□□ 0.82
Ccdc112A0AUP1 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc112A0AUP1 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc112A0AUP1 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc112A0AUP1 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc112A0AUP1 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc112A0AUP1 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc112A0AUP1 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc112A0AUP1 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc112A0AUP1 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC20.18■□□□□ 0.82
Ccdc112A0AUP1 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc112A0AUP1 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc112A0AUP1 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC20.18■□□□□ 0.82
Ccdc112A0AUP1 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc112A0AUP1 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc112A0AUP1 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc112A0AUP1 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc112A0AUP1 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC20.17■□□□□ 0.82
Ccdc112A0AUP1 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc112A0AUP1 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc112A0AUP1 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Ccdc112A0AUP1 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms