Protein–RNA interactions for Protein: A0A1B0GSW2

Gm28729, Predicted gene 28729, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28729A0A1B0GSW2 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.32■□□□□ 0.36
Gm28729A0A1B0GSW2 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Gm28729A0A1B0GSW2 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Gm28729A0A1B0GSW2 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm28729A0A1B0GSW2 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm28729A0A1B0GSW2 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.32■□□□□ 0.36
Gm28729A0A1B0GSW2 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.32■□□□□ 0.36
Gm28729A0A1B0GSW2 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm28729A0A1B0GSW2 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm28729A0A1B0GSW2 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.32■□□□□ 0.36
Gm28729A0A1B0GSW2 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm28729A0A1B0GSW2 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm28729A0A1B0GSW2 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm28729A0A1B0GSW2 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm28729A0A1B0GSW2 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Gm28729A0A1B0GSW2 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm28729A0A1B0GSW2 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Gm28729A0A1B0GSW2 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm28729A0A1B0GSW2 AA414768-201ENSMUST00000121924 1257 ntBASIC17.31■□□□□ 0.36
Gm28729A0A1B0GSW2 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Gm28729A0A1B0GSW2 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Gm28729A0A1B0GSW2 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm28729A0A1B0GSW2 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm28729A0A1B0GSW2 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.31■□□□□ 0.36
Gm28729A0A1B0GSW2 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Gm28729A0A1B0GSW2 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm28729A0A1B0GSW2 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm28729A0A1B0GSW2 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm28729A0A1B0GSW2 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm28729A0A1B0GSW2 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Gm28729A0A1B0GSW2 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm28729A0A1B0GSW2 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm28729A0A1B0GSW2 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm28729A0A1B0GSW2 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm28729A0A1B0GSW2 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm28729A0A1B0GSW2 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Gm28729A0A1B0GSW2 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm28729A0A1B0GSW2 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm28729A0A1B0GSW2 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm28729A0A1B0GSW2 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm28729A0A1B0GSW2 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm28729A0A1B0GSW2 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Gm28729A0A1B0GSW2 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.3■□□□□ 0.36
Gm28729A0A1B0GSW2 Gm22697-201ENSMUST00000175194 63 ntBASIC17.3■□□□□ 0.36
Gm28729A0A1B0GSW2 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.3■□□□□ 0.36
Gm28729A0A1B0GSW2 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Gm28729A0A1B0GSW2 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm28729A0A1B0GSW2 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm28729A0A1B0GSW2 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm28729A0A1B0GSW2 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Gm28729A0A1B0GSW2 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.3■□□□□ 0.36
Gm28729A0A1B0GSW2 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm28729A0A1B0GSW2 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm28729A0A1B0GSW2 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm28729A0A1B0GSW2 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Gm28729A0A1B0GSW2 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Gm28729A0A1B0GSW2 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm28729A0A1B0GSW2 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.29■□□□□ 0.36
Gm28729A0A1B0GSW2 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm28729A0A1B0GSW2 Gm10418-201ENSMUST00000100943 576 ntBASIC17.29■□□□□ 0.36
Gm28729A0A1B0GSW2 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Gm28729A0A1B0GSW2 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm28729A0A1B0GSW2 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm28729A0A1B0GSW2 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm28729A0A1B0GSW2 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm28729A0A1B0GSW2 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Gm28729A0A1B0GSW2 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm28729A0A1B0GSW2 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm28729A0A1B0GSW2 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Gm28729A0A1B0GSW2 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm28729A0A1B0GSW2 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm28729A0A1B0GSW2 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm28729A0A1B0GSW2 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm28729A0A1B0GSW2 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm28729A0A1B0GSW2 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.28■□□□□ 0.36
Gm28729A0A1B0GSW2 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm28729A0A1B0GSW2 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.28■□□□□ 0.36
Gm28729A0A1B0GSW2 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm28729A0A1B0GSW2 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm28729A0A1B0GSW2 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.28■□□□□ 0.36
Gm28729A0A1B0GSW2 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Gm28729A0A1B0GSW2 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm28729A0A1B0GSW2 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm28729A0A1B0GSW2 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm28729A0A1B0GSW2 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Gm28729A0A1B0GSW2 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm28729A0A1B0GSW2 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm28729A0A1B0GSW2 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Gm28729A0A1B0GSW2 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Gm28729A0A1B0GSW2 Gm18101-201ENSMUST00000215769 548 ntBASIC17.27■□□□□ 0.36
Gm28729A0A1B0GSW2 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.27■□□□□ 0.36
Gm28729A0A1B0GSW2 Gm7370-201ENSMUST00000219471 767 ntBASIC17.27■□□□□ 0.36
Gm28729A0A1B0GSW2 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm28729A0A1B0GSW2 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm28729A0A1B0GSW2 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.27■□□□□ 0.35
Gm28729A0A1B0GSW2 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gm28729A0A1B0GSW2 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gm28729A0A1B0GSW2 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Gm28729A0A1B0GSW2 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Gm28729A0A1B0GSW2 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms