Protein–RNA interactions for Protein: A0A140T8V5

Pcna-ps2, Proliferating cell nuclear antigen, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcna-ps2A0A140T8V5 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcna-ps2A0A140T8V5 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcna-ps2A0A140T8V5 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcna-ps2A0A140T8V5 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcna-ps2A0A140T8V5 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.78■□□□□ 0.44
Pcna-ps2A0A140T8V5 Gm22325-201ENSMUST00000158904 308 ntBASIC17.78■□□□□ 0.44
Pcna-ps2A0A140T8V5 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcna-ps2A0A140T8V5 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.78■□□□□ 0.44
Pcna-ps2A0A140T8V5 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.78■□□□□ 0.44
Pcna-ps2A0A140T8V5 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcna-ps2A0A140T8V5 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Pcna-ps2A0A140T8V5 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcna-ps2A0A140T8V5 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcna-ps2A0A140T8V5 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcna-ps2A0A140T8V5 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.78■□□□□ 0.44
Pcna-ps2A0A140T8V5 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcna-ps2A0A140T8V5 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcna-ps2A0A140T8V5 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcna-ps2A0A140T8V5 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcna-ps2A0A140T8V5 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcna-ps2A0A140T8V5 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Pcna-ps2A0A140T8V5 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcna-ps2A0A140T8V5 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcna-ps2A0A140T8V5 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcna-ps2A0A140T8V5 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Pcna-ps2A0A140T8V5 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcna-ps2A0A140T8V5 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcna-ps2A0A140T8V5 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcna-ps2A0A140T8V5 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcna-ps2A0A140T8V5 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcna-ps2A0A140T8V5 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcna-ps2A0A140T8V5 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcna-ps2A0A140T8V5 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcna-ps2A0A140T8V5 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcna-ps2A0A140T8V5 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcna-ps2A0A140T8V5 Gm26524-201ENSMUST00000192339 390 ntBASIC17.76■□□□□ 0.43
Pcna-ps2A0A140T8V5 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcna-ps2A0A140T8V5 Rab3c-203ENSMUST00000224180 967 ntBASIC17.76■□□□□ 0.43
Pcna-ps2A0A140T8V5 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.76■□□□□ 0.43
Pcna-ps2A0A140T8V5 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcna-ps2A0A140T8V5 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.76■□□□□ 0.43
Pcna-ps2A0A140T8V5 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcna-ps2A0A140T8V5 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcna-ps2A0A140T8V5 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.76■□□□□ 0.43
Pcna-ps2A0A140T8V5 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcna-ps2A0A140T8V5 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcna-ps2A0A140T8V5 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcna-ps2A0A140T8V5 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcna-ps2A0A140T8V5 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcna-ps2A0A140T8V5 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcna-ps2A0A140T8V5 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcna-ps2A0A140T8V5 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcna-ps2A0A140T8V5 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcna-ps2A0A140T8V5 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcna-ps2A0A140T8V5 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcna-ps2A0A140T8V5 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcna-ps2A0A140T8V5 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcna-ps2A0A140T8V5 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcna-ps2A0A140T8V5 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcna-ps2A0A140T8V5 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.75■□□□□ 0.43
Pcna-ps2A0A140T8V5 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.75■□□□□ 0.43
Pcna-ps2A0A140T8V5 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.75■□□□□ 0.43
Pcna-ps2A0A140T8V5 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcna-ps2A0A140T8V5 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcna-ps2A0A140T8V5 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.75■□□□□ 0.43
Pcna-ps2A0A140T8V5 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcna-ps2A0A140T8V5 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Pcna-ps2A0A140T8V5 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcna-ps2A0A140T8V5 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcna-ps2A0A140T8V5 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcna-ps2A0A140T8V5 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Pcna-ps2A0A140T8V5 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcna-ps2A0A140T8V5 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Pcna-ps2A0A140T8V5 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcna-ps2A0A140T8V5 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcna-ps2A0A140T8V5 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcna-ps2A0A140T8V5 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.74■□□□□ 0.43
Pcna-ps2A0A140T8V5 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.74■□□□□ 0.43
Pcna-ps2A0A140T8V5 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.74■□□□□ 0.43
Pcna-ps2A0A140T8V5 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcna-ps2A0A140T8V5 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcna-ps2A0A140T8V5 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.74■□□□□ 0.43
Pcna-ps2A0A140T8V5 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcna-ps2A0A140T8V5 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcna-ps2A0A140T8V5 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcna-ps2A0A140T8V5 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcna-ps2A0A140T8V5 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Pcna-ps2A0A140T8V5 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Pcna-ps2A0A140T8V5 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.73■□□□□ 0.43
Pcna-ps2A0A140T8V5 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcna-ps2A0A140T8V5 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcna-ps2A0A140T8V5 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
Pcna-ps2A0A140T8V5 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.73■□□□□ 0.43
Pcna-ps2A0A140T8V5 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Pcna-ps2A0A140T8V5 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.73■□□□□ 0.43
Pcna-ps2A0A140T8V5 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcna-ps2A0A140T8V5 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcna-ps2A0A140T8V5 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pcna-ps2A0A140T8V5 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Pcna-ps2A0A140T8V5 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms