Protein–RNA interactions for Protein: A0A140LIW3

Frmpd3, FERM and PDZ domain-containing 3, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Frmpd3A0A140LIW3 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Frmpd3A0A140LIW3 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Frmpd3A0A140LIW3 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Frmpd3A0A140LIW3 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Frmpd3A0A140LIW3 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Frmpd3A0A140LIW3 Gm43347-201ENSMUST00000200226 580 ntBASIC21.15■□□□□ 0.98
Frmpd3A0A140LIW3 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Frmpd3A0A140LIW3 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Frmpd3A0A140LIW3 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Frmpd3A0A140LIW3 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC21.14■□□□□ 0.98
Frmpd3A0A140LIW3 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Frmpd3A0A140LIW3 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Frmpd3A0A140LIW3 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Frmpd3A0A140LIW3 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC21.14■□□□□ 0.97
Frmpd3A0A140LIW3 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC21.14■□□□□ 0.97
Frmpd3A0A140LIW3 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Frmpd3A0A140LIW3 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC21.13■□□□□ 0.97
Frmpd3A0A140LIW3 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC21.13■□□□□ 0.97
Frmpd3A0A140LIW3 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Frmpd3A0A140LIW3 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC21.13■□□□□ 0.97
Frmpd3A0A140LIW3 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Frmpd3A0A140LIW3 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Frmpd3A0A140LIW3 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Frmpd3A0A140LIW3 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
Frmpd3A0A140LIW3 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC21.13■□□□□ 0.97
Frmpd3A0A140LIW3 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Frmpd3A0A140LIW3 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Frmpd3A0A140LIW3 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Frmpd3A0A140LIW3 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Frmpd3A0A140LIW3 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Frmpd3A0A140LIW3 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Frmpd3A0A140LIW3 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Frmpd3A0A140LIW3 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Frmpd3A0A140LIW3 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Frmpd3A0A140LIW3 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Frmpd3A0A140LIW3 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
Frmpd3A0A140LIW3 AC132104.2-201ENSMUST00000215011 266 ntBASIC21.12■□□□□ 0.97
Frmpd3A0A140LIW3 AC125350.1-201ENSMUST00000225115 903 ntBASIC21.12■□□□□ 0.97
Frmpd3A0A140LIW3 AC159301.1-201ENSMUST00000225130 1182 ntBASIC21.12■□□□□ 0.97
Frmpd3A0A140LIW3 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Frmpd3A0A140LIW3 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Frmpd3A0A140LIW3 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
Frmpd3A0A140LIW3 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Frmpd3A0A140LIW3 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Frmpd3A0A140LIW3 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Frmpd3A0A140LIW3 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Frmpd3A0A140LIW3 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC21.11■□□□□ 0.97
Frmpd3A0A140LIW3 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Frmpd3A0A140LIW3 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC21.11■□□□□ 0.97
Frmpd3A0A140LIW3 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC21.11■□□□□ 0.97
Frmpd3A0A140LIW3 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Frmpd3A0A140LIW3 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC21.11■□□□□ 0.97
Frmpd3A0A140LIW3 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Frmpd3A0A140LIW3 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Frmpd3A0A140LIW3 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Frmpd3A0A140LIW3 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Frmpd3A0A140LIW3 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Frmpd3A0A140LIW3 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Frmpd3A0A140LIW3 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC21.11■□□□□ 0.97
Frmpd3A0A140LIW3 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Frmpd3A0A140LIW3 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Frmpd3A0A140LIW3 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Frmpd3A0A140LIW3 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Frmpd3A0A140LIW3 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Frmpd3A0A140LIW3 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Frmpd3A0A140LIW3 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Frmpd3A0A140LIW3 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Frmpd3A0A140LIW3 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC21.1■□□□□ 0.97
Frmpd3A0A140LIW3 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC21.1■□□□□ 0.97
Frmpd3A0A140LIW3 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Frmpd3A0A140LIW3 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Frmpd3A0A140LIW3 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Frmpd3A0A140LIW3 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Frmpd3A0A140LIW3 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Frmpd3A0A140LIW3 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Frmpd3A0A140LIW3 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Frmpd3A0A140LIW3 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Frmpd3A0A140LIW3 Ighv6-1-201ENSMUST00000193612 343 ntBASIC21.09■□□□□ 0.97
Frmpd3A0A140LIW3 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Frmpd3A0A140LIW3 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Frmpd3A0A140LIW3 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Frmpd3A0A140LIW3 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC21.09■□□□□ 0.97
Frmpd3A0A140LIW3 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Frmpd3A0A140LIW3 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC21.08■□□□□ 0.97
Frmpd3A0A140LIW3 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Frmpd3A0A140LIW3 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Frmpd3A0A140LIW3 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Frmpd3A0A140LIW3 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC21.08■□□□□ 0.97
Frmpd3A0A140LIW3 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Frmpd3A0A140LIW3 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Frmpd3A0A140LIW3 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
Frmpd3A0A140LIW3 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Frmpd3A0A140LIW3 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
Frmpd3A0A140LIW3 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Frmpd3A0A140LIW3 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Frmpd3A0A140LIW3 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Frmpd3A0A140LIW3 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Frmpd3A0A140LIW3 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Frmpd3A0A140LIW3 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Frmpd3A0A140LIW3 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms