Protein–RNA interactions for Protein: A0A140LHH9

Gm35339, Predicted gene, 35339, mousemouse

Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm35339A0A140LHH9 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC37.31■■■■□ 3.56
Gm35339A0A140LHH9 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC37.31■■■■□ 3.56
Gm35339A0A140LHH9 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC37.31■■■■□ 3.56
Gm35339A0A140LHH9 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC37.31■■■■□ 3.56
Gm35339A0A140LHH9 Mir8112-201ENSMUST00000184382 131 ntBASIC37.31■■■■□ 3.56
Gm35339A0A140LHH9 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC37.31■■■■□ 3.56
Gm35339A0A140LHH9 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC37.31■■■■□ 3.56
Gm35339A0A140LHH9 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC37.3■■■■□ 3.56
Gm35339A0A140LHH9 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC37.3■■■■□ 3.56
Gm35339A0A140LHH9 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC37.3■■■■□ 3.56
Gm35339A0A140LHH9 Hsf1-204ENSMUST00000226872 2104 ntBASIC37.3■■■■□ 3.56
Gm35339A0A140LHH9 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC37.3■■■■□ 3.56
Gm35339A0A140LHH9 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC37.3■■■■□ 3.56
Gm35339A0A140LHH9 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC37.29■■■■□ 3.56
Gm35339A0A140LHH9 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC37.29■■■■□ 3.56
Gm35339A0A140LHH9 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC37.29■■■■□ 3.56
Gm35339A0A140LHH9 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC37.29■■■■□ 3.56
Gm35339A0A140LHH9 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC37.29■■■■□ 3.56
Gm35339A0A140LHH9 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC37.29■■■■□ 3.56
Gm35339A0A140LHH9 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC37.28■■■■□ 3.56
Gm35339A0A140LHH9 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC37.28■■■■□ 3.56
Gm35339A0A140LHH9 Gm27525-201ENSMUST00000184465 107 ntBASIC37.28■■■■□ 3.56
Gm35339A0A140LHH9 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC37.28■■■■□ 3.56
Gm35339A0A140LHH9 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC37.28■■■■□ 3.56
Gm35339A0A140LHH9 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC37.28■■■■□ 3.56
Gm35339A0A140LHH9 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC37.28■■■■□ 3.56
Gm35339A0A140LHH9 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC37.27■■■■□ 3.56
Gm35339A0A140LHH9 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC37.27■■■■□ 3.56
Gm35339A0A140LHH9 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC37.27■■■■□ 3.56
Gm35339A0A140LHH9 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC37.27■■■■□ 3.56
Gm35339A0A140LHH9 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC37.26■■■■□ 3.56
Gm35339A0A140LHH9 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC37.26■■■■□ 3.56
Gm35339A0A140LHH9 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC37.26■■■■□ 3.56
Gm35339A0A140LHH9 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC37.26■■■■□ 3.56
Gm35339A0A140LHH9 AC159301.1-201ENSMUST00000225130 1182 ntBASIC37.26■■■■□ 3.56
Gm35339A0A140LHH9 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC37.26■■■■□ 3.55
Gm35339A0A140LHH9 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC37.26■■■■□ 3.55
Gm35339A0A140LHH9 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC37.26■■■■□ 3.55
Gm35339A0A140LHH9 Gm9885-202ENSMUST00000186234 2209 ntBASIC37.25■■■■□ 3.55
Gm35339A0A140LHH9 Gm12895-201ENSMUST00000122214 226 ntBASIC37.25■■■■□ 3.55
Gm35339A0A140LHH9 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC37.25■■■■□ 3.55
Gm35339A0A140LHH9 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC37.25■■■■□ 3.55
Gm35339A0A140LHH9 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC37.25■■■■□ 3.55
Gm35339A0A140LHH9 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC37.25■■■■□ 3.55
Gm35339A0A140LHH9 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC37.25■■■■□ 3.55
Gm35339A0A140LHH9 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC37.25■■■■□ 3.55
Gm35339A0A140LHH9 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC37.25■■■■□ 3.55
Gm35339A0A140LHH9 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC37.25■■■■□ 3.55
Gm35339A0A140LHH9 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC37.25■■■■□ 3.55
Gm35339A0A140LHH9 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC37.25■■■■□ 3.55
Gm35339A0A140LHH9 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC37.24■■■■□ 3.55
Gm35339A0A140LHH9 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC37.24■■■■□ 3.55
Gm35339A0A140LHH9 Gm43347-201ENSMUST00000200226 580 ntBASIC37.24■■■■□ 3.55
Gm35339A0A140LHH9 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC37.24■■■■□ 3.55
Gm35339A0A140LHH9 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC37.24■■■■□ 3.55
Gm35339A0A140LHH9 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC37.23■■■■□ 3.55
Gm35339A0A140LHH9 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC37.23■■■■□ 3.55
Gm35339A0A140LHH9 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC37.23■■■■□ 3.55
Gm35339A0A140LHH9 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC37.23■■■■□ 3.55
Gm35339A0A140LHH9 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC37.23■■■■□ 3.55
Gm35339A0A140LHH9 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC37.22■■■■□ 3.55
Gm35339A0A140LHH9 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC37.22■■■■□ 3.55
Gm35339A0A140LHH9 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC37.22■■■■□ 3.55
Gm35339A0A140LHH9 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC37.22■■■■□ 3.55
Gm35339A0A140LHH9 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC37.22■■■■□ 3.55
Gm35339A0A140LHH9 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC37.21■■■■□ 3.55
Gm35339A0A140LHH9 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC37.21■■■■□ 3.55
Gm35339A0A140LHH9 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC37.21■■■■□ 3.55
Gm35339A0A140LHH9 Gm18733-201ENSMUST00000173950 856 ntBASIC37.21■■■■□ 3.55
Gm35339A0A140LHH9 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC37.21■■■■□ 3.55
Gm35339A0A140LHH9 Gm5864-201ENSMUST00000202263 970 ntBASIC37.21■■■■□ 3.55
Gm35339A0A140LHH9 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC37.2■■■■□ 3.55
Gm35339A0A140LHH9 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC37.2■■■■□ 3.55
Gm35339A0A140LHH9 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC37.2■■■■□ 3.55
Gm35339A0A140LHH9 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC37.2■■■■□ 3.55
Gm35339A0A140LHH9 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC37.2■■■■□ 3.55
Gm35339A0A140LHH9 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC37.19■■■■□ 3.54
Gm35339A0A140LHH9 Zkscan4-202ENSMUST00000225845 1506 ntBASIC37.19■■■■□ 3.54
Gm35339A0A140LHH9 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC37.19■■■■□ 3.54
Gm35339A0A140LHH9 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC37.19■■■■□ 3.54
Gm35339A0A140LHH9 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC37.19■■■■□ 3.54
Gm35339A0A140LHH9 Gm43073-201ENSMUST00000198200 1189 ntBASIC37.19■■■■□ 3.54
Gm35339A0A140LHH9 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC37.19■■■■□ 3.54
Gm35339A0A140LHH9 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC37.19■■■■□ 3.54
Gm35339A0A140LHH9 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC37.18■■■■□ 3.54
Gm35339A0A140LHH9 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC37.18■■■■□ 3.54
Gm35339A0A140LHH9 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC37.18■■■■□ 3.54
Gm35339A0A140LHH9 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC37.18■■■■□ 3.54
Gm35339A0A140LHH9 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC37.18■■■■□ 3.54
Gm35339A0A140LHH9 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC37.18■■■■□ 3.54
Gm35339A0A140LHH9 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC37.18■■■■□ 3.54
Gm35339A0A140LHH9 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC37.18■■■■□ 3.54
Gm35339A0A140LHH9 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC37.18■■■■□ 3.54
Gm35339A0A140LHH9 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC37.17■■■■□ 3.54
Gm35339A0A140LHH9 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC37.17■■■■□ 3.54
Gm35339A0A140LHH9 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC37.17■■■■□ 3.54
Gm35339A0A140LHH9 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC37.17■■■■□ 3.54
Gm35339A0A140LHH9 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC37.17■■■■□ 3.54
Gm35339A0A140LHH9 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC37.17■■■■□ 3.54
Gm35339A0A140LHH9 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC37.17■■■■□ 3.54
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms