Protein–RNA interactions for Protein: A0A0J9YTW6

Scn2a, Sodium channel protein, mousemouse

Predictions only

Length 2,006 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2aA0A0J9YTW6 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.26■□□□□ 0.19
Scn2aA0A0J9YTW6 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Scn2aA0A0J9YTW6 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn2aA0A0J9YTW6 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn2aA0A0J9YTW6 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn2aA0A0J9YTW6 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.26■□□□□ 0.19
Scn2aA0A0J9YTW6 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Scn2aA0A0J9YTW6 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Scn2aA0A0J9YTW6 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Scn2aA0A0J9YTW6 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Scn2aA0A0J9YTW6 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Scn2aA0A0J9YTW6 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.26■□□□□ 0.19
Scn2aA0A0J9YTW6 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Scn2aA0A0J9YTW6 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Scn2aA0A0J9YTW6 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn2aA0A0J9YTW6 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn2aA0A0J9YTW6 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn2aA0A0J9YTW6 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn2aA0A0J9YTW6 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn2aA0A0J9YTW6 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Scn2aA0A0J9YTW6 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.25■□□□□ 0.19
Scn2aA0A0J9YTW6 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Scn2aA0A0J9YTW6 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn2aA0A0J9YTW6 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn2aA0A0J9YTW6 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Scn2aA0A0J9YTW6 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.25■□□□□ 0.19
Scn2aA0A0J9YTW6 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Scn2aA0A0J9YTW6 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn2aA0A0J9YTW6 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn2aA0A0J9YTW6 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn2aA0A0J9YTW6 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn2aA0A0J9YTW6 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Scn2aA0A0J9YTW6 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn2aA0A0J9YTW6 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn2aA0A0J9YTW6 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Scn2aA0A0J9YTW6 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.25■□□□□ 0.19
Scn2aA0A0J9YTW6 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn2aA0A0J9YTW6 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn2aA0A0J9YTW6 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.24■□□□□ 0.19
Scn2aA0A0J9YTW6 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.24■□□□□ 0.19
Scn2aA0A0J9YTW6 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
Scn2aA0A0J9YTW6 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.24■□□□□ 0.19
Scn2aA0A0J9YTW6 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn2aA0A0J9YTW6 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.24■□□□□ 0.19
Scn2aA0A0J9YTW6 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.24■□□□□ 0.19
Scn2aA0A0J9YTW6 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Scn2aA0A0J9YTW6 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn2aA0A0J9YTW6 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn2aA0A0J9YTW6 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.24■□□□□ 0.19
Scn2aA0A0J9YTW6 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Scn2aA0A0J9YTW6 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn2aA0A0J9YTW6 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
Scn2aA0A0J9YTW6 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn2aA0A0J9YTW6 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Scn2aA0A0J9YTW6 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Scn2aA0A0J9YTW6 Gm10418-201ENSMUST00000100943 576 ntBASIC16.24■□□□□ 0.19
Scn2aA0A0J9YTW6 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Scn2aA0A0J9YTW6 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.24■□□□□ 0.19
Scn2aA0A0J9YTW6 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.24■□□□□ 0.19
Scn2aA0A0J9YTW6 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn2aA0A0J9YTW6 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.24■□□□□ 0.19
Scn2aA0A0J9YTW6 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Scn2aA0A0J9YTW6 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn2aA0A0J9YTW6 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Scn2aA0A0J9YTW6 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.24■□□□□ 0.19
Scn2aA0A0J9YTW6 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn2aA0A0J9YTW6 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Scn2aA0A0J9YTW6 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Scn2aA0A0J9YTW6 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn2aA0A0J9YTW6 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.23■□□□□ 0.19
Scn2aA0A0J9YTW6 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.23■□□□□ 0.19
Scn2aA0A0J9YTW6 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
Scn2aA0A0J9YTW6 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn2aA0A0J9YTW6 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Scn2aA0A0J9YTW6 Gm11643-201ENSMUST00000119578 864 ntBASIC16.23■□□□□ 0.19
Scn2aA0A0J9YTW6 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.23■□□□□ 0.19
Scn2aA0A0J9YTW6 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn2aA0A0J9YTW6 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn2aA0A0J9YTW6 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Scn2aA0A0J9YTW6 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Scn2aA0A0J9YTW6 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn2aA0A0J9YTW6 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn2aA0A0J9YTW6 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn2aA0A0J9YTW6 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Scn2aA0A0J9YTW6 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn2aA0A0J9YTW6 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn2aA0A0J9YTW6 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.23■□□□□ 0.19
Scn2aA0A0J9YTW6 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Scn2aA0A0J9YTW6 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn2aA0A0J9YTW6 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Scn2aA0A0J9YTW6 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.23■□□□□ 0.19
Scn2aA0A0J9YTW6 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn2aA0A0J9YTW6 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn2aA0A0J9YTW6 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn2aA0A0J9YTW6 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn2aA0A0J9YTW6 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn2aA0A0J9YTW6 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn2aA0A0J9YTW6 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn2aA0A0J9YTW6 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn2aA0A0J9YTW6 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms