Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC15.53■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC15.52■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp783-201ENSMUST00000095946 670 ntBASIC15.52■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC15.52■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.52■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.51■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC15.51■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm43338-201ENSMUST00000198617 2223 ntBASIC15.51■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC15.5■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC15.5■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm44549-201ENSMUST00000208351 577 ntBASIC15.5■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC15.49■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC15.49■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 AC108858.1-201ENSMUST00000228461 1498 ntBASIC15.49■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC15.49■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Wnt10b-205ENSMUST00000226846 1204 ntBASIC15.49■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms