Protein–RNA interactions for Protein: A0A0B4J1J8

Tcrg-V4, T cell receptor gamma, variable 4 (Fragment), mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcrg-V4A0A0B4J1J8 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC13.33□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC13.33□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.32□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC13.32□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC13.32□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC13.32□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC13.3□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC13.3□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC13.3□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC13.3□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.29□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tcrg-V4A0A0B4J1J8 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms