Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Igkv5-43A0A0B4J1J2 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.12■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.12■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Igkv5-43A0A0B4J1J2 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Igkv5-43A0A0B4J1J2 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.11■□□□□ 0.49
Igkv5-43A0A0B4J1J2 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.11■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Igkv5-43A0A0B4J1J2 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.11■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.1■□□□□ 0.49
Igkv5-43A0A0B4J1J2 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Igkv5-43A0A0B4J1J2 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Gm6433-201ENSMUST00000118634 875 ntBASIC18.1■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.1■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Igkv5-43A0A0B4J1J2 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.09■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Igkv5-43A0A0B4J1J2 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.09■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.09■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Igkv5-43A0A0B4J1J2 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
Igkv5-43A0A0B4J1J2 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Igkv5-43A0A0B4J1J2 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.08■□□□□ 0.48
Igkv5-43A0A0B4J1J2 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Igkv5-43A0A0B4J1J2 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Igkv5-43A0A0B4J1J2 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Igkv5-43A0A0B4J1J2 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Igkv5-43A0A0B4J1J2 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Igkv5-43A0A0B4J1J2 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Igkv5-43A0A0B4J1J2 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.08■□□□□ 0.48
Igkv5-43A0A0B4J1J2 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Igkv5-43A0A0B4J1J2 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Igkv5-43A0A0B4J1J2 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Igkv5-43A0A0B4J1J2 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Igkv5-43A0A0B4J1J2 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Igkv5-43A0A0B4J1J2 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Igkv5-43A0A0B4J1J2 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Igkv5-43A0A0B4J1J2 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Igkv5-43A0A0B4J1J2 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Igkv5-43A0A0B4J1J2 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Igkv5-43A0A0B4J1J2 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Igkv5-43A0A0B4J1J2 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Igkv5-43A0A0B4J1J2 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Igkv5-43A0A0B4J1J2 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Igkv5-43A0A0B4J1J2 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Igkv5-43A0A0B4J1J2 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Igkv5-43A0A0B4J1J2 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Igkv5-43A0A0B4J1J2 Gm9987-201ENSMUST00000069768 567 ntBASIC18.07■□□□□ 0.48
Igkv5-43A0A0B4J1J2 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.07■□□□□ 0.48
Igkv5-43A0A0B4J1J2 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Igkv5-43A0A0B4J1J2 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Igkv5-43A0A0B4J1J2 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Igkv5-43A0A0B4J1J2 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.07■□□□□ 0.48
Igkv5-43A0A0B4J1J2 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Igkv5-43A0A0B4J1J2 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Igkv5-43A0A0B4J1J2 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms