Protein–RNA interactions for Protein: A0A0B4J1I1

Igkv16-104, Immunoglobulin kappa variable 16-104 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv16-104A0A0B4J1I1 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Igkv16-104A0A0B4J1I1 Gm9013-201ENSMUST00000132939 882 ntBASIC17.96■□□□□ 0.47
Igkv16-104A0A0B4J1I1 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.96■□□□□ 0.47
Igkv16-104A0A0B4J1I1 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.96■□□□□ 0.47
Igkv16-104A0A0B4J1I1 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
Igkv16-104A0A0B4J1I1 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Igkv16-104A0A0B4J1I1 Notumos-201ENSMUST00000151998 2659 ntBASIC17.95■□□□□ 0.46
Igkv16-104A0A0B4J1I1 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Igkv16-104A0A0B4J1I1 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Igkv16-104A0A0B4J1I1 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.95■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.95■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Gm7213-201ENSMUST00000215977 950 ntBASIC17.95■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.95■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Igkv16-104A0A0B4J1I1 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.94■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.94■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.94■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Igkv16-104A0A0B4J1I1 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Igkv16-104A0A0B4J1I1 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Igkv16-104A0A0B4J1I1 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.93■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Gm27704-201ENSMUST00000185094 107 ntBASIC17.92■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.92■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.92■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Gm29518-201ENSMUST00000190858 372 ntBASIC17.91■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.91■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Igkv16-104A0A0B4J1I1 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.91■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Igkv16-104A0A0B4J1I1 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.9■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Igkv16-104A0A0B4J1I1 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms