Protein–RNA interactions for Protein: A0A0A6YYP6

Sirpb1a, Signal-regulatory protein beta 1A, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1aA0A0A6YYP6 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.81■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC16.81■□□□□ 0.28
Sirpb1aA0A0A6YYP6 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.81■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.81■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.8■□□□□ 0.28
Sirpb1aA0A0A6YYP6 AC131586.2-201ENSMUST00000228370 1512 ntBASIC16.8■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Gm21168-201ENSMUST00000199646 1096 ntBASIC16.8■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.8■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Sirpb1aA0A0A6YYP6 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC16.79■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16.79■□□□□ 0.28
Sirpb1aA0A0A6YYP6 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.79■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.79■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.79■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.79■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.78■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.78■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC16.78■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC16.78■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sirpb1aA0A0A6YYP6 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.77■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Sirpb1aA0A0A6YYP6 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sirpb1aA0A0A6YYP6 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sirpb1aA0A0A6YYP6 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sirpb1aA0A0A6YYP6 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sirpb1aA0A0A6YYP6 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.77■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sirpb1aA0A0A6YYP6 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms