Protein–RNA interactions for Protein: A0A0A6YY38

Ighv1-42, Immunoglobulin heavy variable V1-42 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-42A0A0A6YY38 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ighv1-42A0A0A6YY38 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC16.36■□□□□ 0.21
Ighv1-42A0A0A6YY38 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ighv1-42A0A0A6YY38 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ighv1-42A0A0A6YY38 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ighv1-42A0A0A6YY38 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Ighv1-42A0A0A6YY38 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ighv1-42A0A0A6YY38 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ighv1-42A0A0A6YY38 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ighv1-42A0A0A6YY38 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ighv1-42A0A0A6YY38 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16.35■□□□□ 0.21
Ighv1-42A0A0A6YY38 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ighv1-42A0A0A6YY38 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ighv1-42A0A0A6YY38 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.35■□□□□ 0.21
Ighv1-42A0A0A6YY38 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ighv1-42A0A0A6YY38 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Ighv1-42A0A0A6YY38 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ighv1-42A0A0A6YY38 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ighv1-42A0A0A6YY38 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Ighv1-42A0A0A6YY38 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ighv1-42A0A0A6YY38 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ighv1-42A0A0A6YY38 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ighv1-42A0A0A6YY38 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Ighv1-42A0A0A6YY38 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ighv1-42A0A0A6YY38 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ighv1-42A0A0A6YY38 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ighv1-42A0A0A6YY38 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ighv1-42A0A0A6YY38 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ighv1-42A0A0A6YY38 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ighv1-42A0A0A6YY38 Gm6659-201ENSMUST00000174752 547 ntBASIC16.34■□□□□ 0.21
Ighv1-42A0A0A6YY38 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ighv1-42A0A0A6YY38 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ighv1-42A0A0A6YY38 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.34■□□□□ 0.21
Ighv1-42A0A0A6YY38 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.34■□□□□ 0.21
Ighv1-42A0A0A6YY38 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ighv1-42A0A0A6YY38 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ighv1-42A0A0A6YY38 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ighv1-42A0A0A6YY38 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Ighv1-42A0A0A6YY38 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Ighv1-42A0A0A6YY38 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ighv1-42A0A0A6YY38 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ighv1-42A0A0A6YY38 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ighv1-42A0A0A6YY38 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ighv1-42A0A0A6YY38 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ighv1-42A0A0A6YY38 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.33■□□□□ 0.21
Ighv1-42A0A0A6YY38 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ighv1-42A0A0A6YY38 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ighv1-42A0A0A6YY38 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ighv1-42A0A0A6YY38 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ighv1-42A0A0A6YY38 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ighv1-42A0A0A6YY38 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.33■□□□□ 0.2
Ighv1-42A0A0A6YY38 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ighv1-42A0A0A6YY38 Mir5130-201ENSMUST00000175160 84 ntBASIC16.33■□□□□ 0.2
Ighv1-42A0A0A6YY38 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.33■□□□□ 0.2
Ighv1-42A0A0A6YY38 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ighv1-42A0A0A6YY38 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ighv1-42A0A0A6YY38 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ighv1-42A0A0A6YY38 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ighv1-42A0A0A6YY38 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ighv1-42A0A0A6YY38 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ighv1-42A0A0A6YY38 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ighv1-42A0A0A6YY38 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Ighv1-42A0A0A6YY38 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ighv1-42A0A0A6YY38 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ighv1-42A0A0A6YY38 Gm7638-201ENSMUST00000121348 967 ntBASIC16.32■□□□□ 0.2
Ighv1-42A0A0A6YY38 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ighv1-42A0A0A6YY38 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Ighv1-42A0A0A6YY38 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ighv1-42A0A0A6YY38 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Ighv1-42A0A0A6YY38 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Ighv1-42A0A0A6YY38 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ighv1-42A0A0A6YY38 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ighv1-42A0A0A6YY38 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ighv1-42A0A0A6YY38 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ighv1-42A0A0A6YY38 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ighv1-42A0A0A6YY38 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ighv1-42A0A0A6YY38 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Ighv1-42A0A0A6YY38 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ighv1-42A0A0A6YY38 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ighv1-42A0A0A6YY38 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv1-42A0A0A6YY38 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv1-42A0A0A6YY38 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv1-42A0A0A6YY38 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Ighv1-42A0A0A6YY38 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv1-42A0A0A6YY38 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv1-42A0A0A6YY38 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv1-42A0A0A6YY38 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv1-42A0A0A6YY38 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv1-42A0A0A6YY38 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv1-42A0A0A6YY38 Gm18032-201ENSMUST00000222541 538 ntBASIC16.31■□□□□ 0.2
Ighv1-42A0A0A6YY38 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Ighv1-42A0A0A6YY38 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv1-42A0A0A6YY38 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv1-42A0A0A6YY38 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv1-42A0A0A6YY38 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv1-42A0A0A6YY38 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv1-42A0A0A6YY38 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv1-42A0A0A6YY38 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv1-42A0A0A6YY38 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv1-42A0A0A6YY38 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms