Protein–RNA interactions for Protein: A0A0A6YW37

Ighv1-9, Immunoglobulin heavy variable V1-9 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-9A0A0A6YW37 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ighv1-9A0A0A6YW37 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ighv1-9A0A0A6YW37 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC13.34□□□□□ -0.27
Ighv1-9A0A0A6YW37 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ighv1-9A0A0A6YW37 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Ighv1-9A0A0A6YW37 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ighv1-9A0A0A6YW37 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC13.34□□□□□ -0.27
Ighv1-9A0A0A6YW37 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ighv1-9A0A0A6YW37 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ighv1-9A0A0A6YW37 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ighv1-9A0A0A6YW37 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ighv1-9A0A0A6YW37 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ighv1-9A0A0A6YW37 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ighv1-9A0A0A6YW37 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC13.34□□□□□ -0.27
Ighv1-9A0A0A6YW37 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC13.34□□□□□ -0.27
Ighv1-9A0A0A6YW37 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC13.34□□□□□ -0.27
Ighv1-9A0A0A6YW37 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ighv1-9A0A0A6YW37 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ighv1-9A0A0A6YW37 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ighv1-9A0A0A6YW37 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ighv1-9A0A0A6YW37 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Ighv1-9A0A0A6YW37 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Ighv1-9A0A0A6YW37 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC13.34□□□□□ -0.27
Ighv1-9A0A0A6YW37 Gm44544-201ENSMUST00000207052 1844 ntBASIC13.34□□□□□ -0.27
Ighv1-9A0A0A6YW37 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ighv1-9A0A0A6YW37 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ighv1-9A0A0A6YW37 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ighv1-9A0A0A6YW37 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ighv1-9A0A0A6YW37 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ighv1-9A0A0A6YW37 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC13.33□□□□□ -0.28
Ighv1-9A0A0A6YW37 Gm37194-201ENSMUST00000193092 3031 ntBASIC13.33□□□□□ -0.28
Ighv1-9A0A0A6YW37 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ighv1-9A0A0A6YW37 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC13.33□□□□□ -0.28
Ighv1-9A0A0A6YW37 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ighv1-9A0A0A6YW37 Gm18284-201ENSMUST00000172604 624 ntBASIC13.33□□□□□ -0.28
Ighv1-9A0A0A6YW37 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC13.33□□□□□ -0.28
Ighv1-9A0A0A6YW37 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ighv1-9A0A0A6YW37 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ighv1-9A0A0A6YW37 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ighv1-9A0A0A6YW37 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ighv1-9A0A0A6YW37 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ighv1-9A0A0A6YW37 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ighv1-9A0A0A6YW37 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Ighv1-9A0A0A6YW37 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ighv1-9A0A0A6YW37 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ighv1-9A0A0A6YW37 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ighv1-9A0A0A6YW37 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ighv1-9A0A0A6YW37 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ighv1-9A0A0A6YW37 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC13.32□□□□□ -0.28
Ighv1-9A0A0A6YW37 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ighv1-9A0A0A6YW37 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ighv1-9A0A0A6YW37 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ighv1-9A0A0A6YW37 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Ighv1-9A0A0A6YW37 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Ighv1-9A0A0A6YW37 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ighv1-9A0A0A6YW37 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ighv1-9A0A0A6YW37 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ighv1-9A0A0A6YW37 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC13.32□□□□□ -0.28
Ighv1-9A0A0A6YW37 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ighv1-9A0A0A6YW37 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ighv1-9A0A0A6YW37 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ighv1-9A0A0A6YW37 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC13.32□□□□□ -0.28
Ighv1-9A0A0A6YW37 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ighv1-9A0A0A6YW37 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ighv1-9A0A0A6YW37 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ighv1-9A0A0A6YW37 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ighv1-9A0A0A6YW37 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ighv1-9A0A0A6YW37 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ighv1-9A0A0A6YW37 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ighv1-9A0A0A6YW37 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ighv1-9A0A0A6YW37 Gm7290-201ENSMUST00000104990 617 ntBASIC13.31□□□□□ -0.28
Ighv1-9A0A0A6YW37 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Ighv1-9A0A0A6YW37 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ighv1-9A0A0A6YW37 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ighv1-9A0A0A6YW37 Gm12918-201ENSMUST00000120234 636 ntBASIC13.31□□□□□ -0.28
Ighv1-9A0A0A6YW37 Gm15710-201ENSMUST00000121821 636 ntBASIC13.31□□□□□ -0.28
Ighv1-9A0A0A6YW37 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ighv1-9A0A0A6YW37 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ighv1-9A0A0A6YW37 Gm5075-201ENSMUST00000196916 622 ntBASIC13.31□□□□□ -0.28
Ighv1-9A0A0A6YW37 Gm7291-201ENSMUST00000199147 382 ntBASIC13.31□□□□□ -0.28
Ighv1-9A0A0A6YW37 Gm42569-201ENSMUST00000200539 472 ntBASIC13.31□□□□□ -0.28
Ighv1-9A0A0A6YW37 AC140264.2-202ENSMUST00000218746 817 ntBASIC13.31□□□□□ -0.28
Ighv1-9A0A0A6YW37 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC13.31□□□□□ -0.28
Ighv1-9A0A0A6YW37 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC13.31□□□□□ -0.28
Ighv1-9A0A0A6YW37 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ighv1-9A0A0A6YW37 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ighv1-9A0A0A6YW37 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC13.31□□□□□ -0.28
Ighv1-9A0A0A6YW37 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ighv1-9A0A0A6YW37 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ighv1-9A0A0A6YW37 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ighv1-9A0A0A6YW37 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ighv1-9A0A0A6YW37 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ighv1-9A0A0A6YW37 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ighv1-9A0A0A6YW37 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Ighv1-9A0A0A6YW37 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ighv1-9A0A0A6YW37 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC13.31□□□□□ -0.28
Ighv1-9A0A0A6YW37 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Ighv1-9A0A0A6YW37 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ighv1-9A0A0A6YW37 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ighv1-9A0A0A6YW37 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms