Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-5A0A075B6B5 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC13.73□□□□□ -0.21
Trav6-5A0A075B6B5 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC13.73□□□□□ -0.21
Trav6-5A0A075B6B5 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trav6-5A0A075B6B5 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-5A0A075B6B5 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Trav6-5A0A075B6B5 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC13.73□□□□□ -0.21
Trav6-5A0A075B6B5 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC13.73□□□□□ -0.21
Trav6-5A0A075B6B5 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-5A0A075B6B5 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-5A0A075B6B5 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-5A0A075B6B5 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-5A0A075B6B5 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-5A0A075B6B5 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-5A0A075B6B5 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trav6-5A0A075B6B5 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-5A0A075B6B5 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-5A0A075B6B5 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trav6-5A0A075B6B5 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trav6-5A0A075B6B5 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-5A0A075B6B5 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-5A0A075B6B5 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC13.72□□□□□ -0.21
Trav6-5A0A075B6B5 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-5A0A075B6B5 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-5A0A075B6B5 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trav6-5A0A075B6B5 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-5A0A075B6B5 Gm13216-201ENSMUST00000117145 591 ntBASIC13.72□□□□□ -0.21
Trav6-5A0A075B6B5 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-5A0A075B6B5 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-5A0A075B6B5 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-5A0A075B6B5 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-5A0A075B6B5 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-5A0A075B6B5 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-5A0A075B6B5 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-5A0A075B6B5 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-5A0A075B6B5 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-5A0A075B6B5 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trav6-5A0A075B6B5 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-5A0A075B6B5 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-5A0A075B6B5 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-5A0A075B6B5 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-5A0A075B6B5 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC13.72□□□□□ -0.21
Trav6-5A0A075B6B5 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-5A0A075B6B5 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-5A0A075B6B5 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-5A0A075B6B5 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Trav6-5A0A075B6B5 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-5A0A075B6B5 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-5A0A075B6B5 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-5A0A075B6B5 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-5A0A075B6B5 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-5A0A075B6B5 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-5A0A075B6B5 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-5A0A075B6B5 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-5A0A075B6B5 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-5A0A075B6B5 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-5A0A075B6B5 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Trav6-5A0A075B6B5 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC13.71□□□□□ -0.21
Trav6-5A0A075B6B5 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-5A0A075B6B5 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-5A0A075B6B5 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-5A0A075B6B5 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-5A0A075B6B5 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav6-5A0A075B6B5 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav6-5A0A075B6B5 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav6-5A0A075B6B5 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trav6-5A0A075B6B5 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-5A0A075B6B5 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-5A0A075B6B5 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-5A0A075B6B5 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-5A0A075B6B5 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-5A0A075B6B5 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-5A0A075B6B5 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Trav6-5A0A075B6B5 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Trav6-5A0A075B6B5 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-5A0A075B6B5 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC13.7□□□□□ -0.22
Trav6-5A0A075B6B5 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC13.7□□□□□ -0.22
Trav6-5A0A075B6B5 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-5A0A075B6B5 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-5A0A075B6B5 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trav6-5A0A075B6B5 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-5A0A075B6B5 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-5A0A075B6B5 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trav6-5A0A075B6B5 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-5A0A075B6B5 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-5A0A075B6B5 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-5A0A075B6B5 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-5A0A075B6B5 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-5A0A075B6B5 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-5A0A075B6B5 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-5A0A075B6B5 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-5A0A075B6B5 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-5A0A075B6B5 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-5A0A075B6B5 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-5A0A075B6B5 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trav6-5A0A075B6B5 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-5A0A075B6B5 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC13.69□□□□□ -0.22
Trav6-5A0A075B6B5 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Trav6-5A0A075B6B5 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-5A0A075B6B5 Gm12922-201ENSMUST00000120626 809 ntBASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms