Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6-4A0A075B6B4 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6-4A0A075B6B4 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC13.65□□□□□ -0.22
Trav6-4A0A075B6B4 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6-4A0A075B6B4 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6-4A0A075B6B4 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6-4A0A075B6B4 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6-4A0A075B6B4 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6-4A0A075B6B4 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6-4A0A075B6B4 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6-4A0A075B6B4 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6-4A0A075B6B4 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC13.64□□□□□ -0.23
Trav6-4A0A075B6B4 Gm37374-201ENSMUST00000194954 1829 ntBASIC13.64□□□□□ -0.23
Trav6-4A0A075B6B4 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6-4A0A075B6B4 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6-4A0A075B6B4 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6-4A0A075B6B4 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6-4A0A075B6B4 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6-4A0A075B6B4 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6-4A0A075B6B4 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav6-4A0A075B6B4 Gm12669-201ENSMUST00000122162 1009 ntBASIC13.64□□□□□ -0.23
Trav6-4A0A075B6B4 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC13.64□□□□□ -0.23
Trav6-4A0A075B6B4 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC13.64□□□□□ -0.23
Trav6-4A0A075B6B4 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC13.64□□□□□ -0.23
Trav6-4A0A075B6B4 Spcs1-207ENSMUST00000228767 1008 ntBASIC13.64□□□□□ -0.23
Trav6-4A0A075B6B4 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Trav6-4A0A075B6B4 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC13.64□□□□□ -0.23
Trav6-4A0A075B6B4 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6-4A0A075B6B4 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-4A0A075B6B4 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-4A0A075B6B4 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-4A0A075B6B4 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-4A0A075B6B4 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-4A0A075B6B4 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-4A0A075B6B4 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trav6-4A0A075B6B4 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trav6-4A0A075B6B4 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-4A0A075B6B4 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-4A0A075B6B4 Gm18666-201ENSMUST00000190039 958 ntBASIC13.63□□□□□ -0.23
Trav6-4A0A075B6B4 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC13.63□□□□□ -0.23
Trav6-4A0A075B6B4 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-4A0A075B6B4 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Trav6-4A0A075B6B4 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-4A0A075B6B4 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-4A0A075B6B4 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-4A0A075B6B4 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-4A0A075B6B4 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-4A0A075B6B4 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC13.63□□□□□ -0.23
Trav6-4A0A075B6B4 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC13.63□□□□□ -0.23
Trav6-4A0A075B6B4 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trav6-4A0A075B6B4 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trav6-4A0A075B6B4 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6-4A0A075B6B4 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6-4A0A075B6B4 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6-4A0A075B6B4 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6-4A0A075B6B4 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6-4A0A075B6B4 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6-4A0A075B6B4 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trav6-4A0A075B6B4 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Trav6-4A0A075B6B4 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trav6-4A0A075B6B4 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6-4A0A075B6B4 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC13.62□□□□□ -0.23
Trav6-4A0A075B6B4 Gm20760-201ENSMUST00000179197 648 ntBASIC13.62□□□□□ -0.23
Trav6-4A0A075B6B4 Gm44878-201ENSMUST00000205812 1295 ntBASIC13.62□□□□□ -0.23
Trav6-4A0A075B6B4 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC13.62□□□□□ -0.23
Trav6-4A0A075B6B4 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC13.62□□□□□ -0.23
Trav6-4A0A075B6B4 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6-4A0A075B6B4 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6-4A0A075B6B4 Grk6-206ENSMUST00000224995 2971 ntBASIC13.62□□□□□ -0.23
Trav6-4A0A075B6B4 AC163280.1-201ENSMUST00000228194 1100 ntBASIC13.62□□□□□ -0.23
Trav6-4A0A075B6B4 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6-4A0A075B6B4 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC13.62□□□□□ -0.23
Trav6-4A0A075B6B4 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6-4A0A075B6B4 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6-4A0A075B6B4 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6-4A0A075B6B4 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6-4A0A075B6B4 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trav6-4A0A075B6B4 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6-4A0A075B6B4 AC108858.1-201ENSMUST00000228461 1498 ntBASIC13.61□□□□□ -0.23
Trav6-4A0A075B6B4 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Trav6-4A0A075B6B4 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Trav6-4A0A075B6B4 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-4A0A075B6B4 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC13.61□□□□□ -0.23
Trav6-4A0A075B6B4 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Trav6-4A0A075B6B4 Mir6349-201ENSMUST00000184059 97 ntBASIC13.61□□□□□ -0.23
Trav6-4A0A075B6B4 Alkbh1-212ENSMUST00000185301 408 ntBASIC13.61□□□□□ -0.23
Trav6-4A0A075B6B4 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-4A0A075B6B4 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-4A0A075B6B4 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-4A0A075B6B4 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-4A0A075B6B4 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-4A0A075B6B4 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC13.61□□□□□ -0.23
Trav6-4A0A075B6B4 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-4A0A075B6B4 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-4A0A075B6B4 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-4A0A075B6B4 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-4A0A075B6B4 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-4A0A075B6B4 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-4A0A075B6B4 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-4A0A075B6B4 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms