Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6n-6A0A075B6B2 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC13.21□□□□□ -0.29
Trav6n-6A0A075B6B2 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6n-6A0A075B6B2 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC13.21□□□□□ -0.29
Trav6n-6A0A075B6B2 Gm42642-201ENSMUST00000200683 355 ntBASIC13.21□□□□□ -0.29
Trav6n-6A0A075B6B2 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC13.21□□□□□ -0.29
Trav6n-6A0A075B6B2 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC13.21□□□□□ -0.29
Trav6n-6A0A075B6B2 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6n-6A0A075B6B2 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Trav6n-6A0A075B6B2 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6n-6A0A075B6B2 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6n-6A0A075B6B2 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6n-6A0A075B6B2 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trav6n-6A0A075B6B2 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC13.21□□□□□ -0.29
Trav6n-6A0A075B6B2 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6n-6A0A075B6B2 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC13.21□□□□□ -0.3
Trav6n-6A0A075B6B2 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trav6n-6A0A075B6B2 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav6n-6A0A075B6B2 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav6n-6A0A075B6B2 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6n-6A0A075B6B2 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6n-6A0A075B6B2 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6n-6A0A075B6B2 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6n-6A0A075B6B2 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6n-6A0A075B6B2 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Trav6n-6A0A075B6B2 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6n-6A0A075B6B2 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC13.2□□□□□ -0.3
Trav6n-6A0A075B6B2 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6n-6A0A075B6B2 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Trav6n-6A0A075B6B2 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6n-6A0A075B6B2 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6n-6A0A075B6B2 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC13.2□□□□□ -0.3
Trav6n-6A0A075B6B2 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC13.2□□□□□ -0.3
Trav6n-6A0A075B6B2 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC13.2□□□□□ -0.3
Trav6n-6A0A075B6B2 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6n-6A0A075B6B2 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6n-6A0A075B6B2 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6n-6A0A075B6B2 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6n-6A0A075B6B2 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6n-6A0A075B6B2 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trav6n-6A0A075B6B2 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Trav6n-6A0A075B6B2 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6n-6A0A075B6B2 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC13.2□□□□□ -0.3
Trav6n-6A0A075B6B2 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6n-6A0A075B6B2 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6n-6A0A075B6B2 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6n-6A0A075B6B2 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC13.2□□□□□ -0.3
Trav6n-6A0A075B6B2 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC13.2□□□□□ -0.3
Trav6n-6A0A075B6B2 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6n-6A0A075B6B2 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6n-6A0A075B6B2 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6n-6A0A075B6B2 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6n-6A0A075B6B2 Gm13234-201ENSMUST00000120010 747 ntBASIC13.19□□□□□ -0.3
Trav6n-6A0A075B6B2 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Trav6n-6A0A075B6B2 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6n-6A0A075B6B2 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6n-6A0A075B6B2 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trav6n-6A0A075B6B2 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6n-6A0A075B6B2 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6n-6A0A075B6B2 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6n-6A0A075B6B2 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6n-6A0A075B6B2 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6n-6A0A075B6B2 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6n-6A0A075B6B2 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6n-6A0A075B6B2 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6n-6A0A075B6B2 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6n-6A0A075B6B2 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6n-6A0A075B6B2 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6n-6A0A075B6B2 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trav6n-6A0A075B6B2 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trav6n-6A0A075B6B2 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC13.18□□□□□ -0.3
Trav6n-6A0A075B6B2 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6n-6A0A075B6B2 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6n-6A0A075B6B2 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6n-6A0A075B6B2 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6n-6A0A075B6B2 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6n-6A0A075B6B2 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6n-6A0A075B6B2 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6n-6A0A075B6B2 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6n-6A0A075B6B2 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6n-6A0A075B6B2 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6n-6A0A075B6B2 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6n-6A0A075B6B2 Gm7860-201ENSMUST00000121190 879 ntBASIC13.18□□□□□ -0.3
Trav6n-6A0A075B6B2 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6n-6A0A075B6B2 CT030146.1-201ENSMUST00000220919 217 ntBASIC13.18□□□□□ -0.3
Trav6n-6A0A075B6B2 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6n-6A0A075B6B2 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6n-6A0A075B6B2 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6n-6A0A075B6B2 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6n-6A0A075B6B2 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6n-6A0A075B6B2 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6n-6A0A075B6B2 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC13.18□□□□□ -0.3
Trav6n-6A0A075B6B2 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Trav6n-6A0A075B6B2 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6n-6A0A075B6B2 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6n-6A0A075B6B2 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6n-6A0A075B6B2 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6n-6A0A075B6B2 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6n-6A0A075B6B2 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6n-6A0A075B6B2 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms