Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
Trav16nA0A075B634 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav16nA0A075B634 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav16nA0A075B634 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav16nA0A075B634 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC13.43□□□□□ -0.26
Trav16nA0A075B634 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav16nA0A075B634 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav16nA0A075B634 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Trav16nA0A075B634 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav16nA0A075B634 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Trav16nA0A075B634 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav16nA0A075B634 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav16nA0A075B634 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav16nA0A075B634 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav16nA0A075B634 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
Trav16nA0A075B634 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav16nA0A075B634 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC13.42□□□□□ -0.26
Trav16nA0A075B634 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav16nA0A075B634 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav16nA0A075B634 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC13.42□□□□□ -0.26
Trav16nA0A075B634 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav16nA0A075B634 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav16nA0A075B634 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav16nA0A075B634 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav16nA0A075B634 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav16nA0A075B634 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav16nA0A075B634 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav16nA0A075B634 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC13.42□□□□□ -0.26
Trav16nA0A075B634 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav16nA0A075B634 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav16nA0A075B634 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav16nA0A075B634 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav16nA0A075B634 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav16nA0A075B634 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav16nA0A075B634 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav16nA0A075B634 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav16nA0A075B634 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav16nA0A075B634 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav16nA0A075B634 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav16nA0A075B634 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav16nA0A075B634 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav16nA0A075B634 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav16nA0A075B634 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Trav16nA0A075B634 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC13.41□□□□□ -0.26
Trav16nA0A075B634 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav16nA0A075B634 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav16nA0A075B634 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav16nA0A075B634 Gm43338-201ENSMUST00000198617 2223 ntBASIC13.41□□□□□ -0.26
Trav16nA0A075B634 Gm43808-201ENSMUST00000202534 2065 ntBASIC13.41□□□□□ -0.26
Trav16nA0A075B634 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav16nA0A075B634 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav16nA0A075B634 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav16nA0A075B634 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Trav16nA0A075B634 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav16nA0A075B634 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav16nA0A075B634 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav16nA0A075B634 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav16nA0A075B634 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav16nA0A075B634 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav16nA0A075B634 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav16nA0A075B634 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav16nA0A075B634 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav16nA0A075B634 Gm14281-201ENSMUST00000121700 1294 ntBASIC13.4□□□□□ -0.26
Trav16nA0A075B634 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav16nA0A075B634 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC13.4□□□□□ -0.26
Trav16nA0A075B634 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC13.4□□□□□ -0.26
Trav16nA0A075B634 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav16nA0A075B634 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav16nA0A075B634 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav16nA0A075B634 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav16nA0A075B634 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav16nA0A075B634 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav16nA0A075B634 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Trav16nA0A075B634 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav16nA0A075B634 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav16nA0A075B634 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav16nA0A075B634 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav16nA0A075B634 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Trav16nA0A075B634 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav16nA0A075B634 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav16nA0A075B634 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav16nA0A075B634 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC13.39□□□□□ -0.27
Trav16nA0A075B634 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav16nA0A075B634 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav16nA0A075B634 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Trav16nA0A075B634 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav16nA0A075B634 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav16nA0A075B634 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC13.39□□□□□ -0.27
Trav16nA0A075B634 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav16nA0A075B634 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav16nA0A075B634 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav16nA0A075B634 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav16nA0A075B634 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav16nA0A075B634 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav16nA0A075B634 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav16nA0A075B634 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav16nA0A075B634 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trav16nA0A075B634 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trav16nA0A075B634 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav16nA0A075B634 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms