Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav16d-dv11A0A075B617 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trav16d-dv11A0A075B617 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav16d-dv11A0A075B617 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC13.04□□□□□ -0.32
Trav16d-dv11A0A075B617 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav16d-dv11A0A075B617 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav16d-dv11A0A075B617 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav16d-dv11A0A075B617 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav16d-dv11A0A075B617 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav16d-dv11A0A075B617 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trav16d-dv11A0A075B617 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav16d-dv11A0A075B617 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav16d-dv11A0A075B617 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav16d-dv11A0A075B617 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trav16d-dv11A0A075B617 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav16d-dv11A0A075B617 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav16d-dv11A0A075B617 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav16d-dv11A0A075B617 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trav16d-dv11A0A075B617 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav16d-dv11A0A075B617 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trav16d-dv11A0A075B617 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav16d-dv11A0A075B617 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav16d-dv11A0A075B617 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
Trav16d-dv11A0A075B617 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav16d-dv11A0A075B617 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav16d-dv11A0A075B617 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav16d-dv11A0A075B617 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav16d-dv11A0A075B617 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trav16d-dv11A0A075B617 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav16d-dv11A0A075B617 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav16d-dv11A0A075B617 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav16d-dv11A0A075B617 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav16d-dv11A0A075B617 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav16d-dv11A0A075B617 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav16d-dv11A0A075B617 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Trav16d-dv11A0A075B617 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav16d-dv11A0A075B617 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav16d-dv11A0A075B617 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav16d-dv11A0A075B617 Gm37374-201ENSMUST00000194954 1829 ntBASIC13.02□□□□□ -0.32
Trav16d-dv11A0A075B617 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav16d-dv11A0A075B617 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav16d-dv11A0A075B617 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav16d-dv11A0A075B617 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav16d-dv11A0A075B617 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC13.02□□□□□ -0.33
Trav16d-dv11A0A075B617 Gm27032-201ENSMUST00000183124 1116 ntBASIC13.02□□□□□ -0.33
Trav16d-dv11A0A075B617 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav16d-dv11A0A075B617 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav16d-dv11A0A075B617 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav16d-dv11A0A075B617 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav16d-dv11A0A075B617 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav16d-dv11A0A075B617 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Trav16d-dv11A0A075B617 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav16d-dv11A0A075B617 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
Trav16d-dv11A0A075B617 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav16d-dv11A0A075B617 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav16d-dv11A0A075B617 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav16d-dv11A0A075B617 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav16d-dv11A0A075B617 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav16d-dv11A0A075B617 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav16d-dv11A0A075B617 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav16d-dv11A0A075B617 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav16d-dv11A0A075B617 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav16d-dv11A0A075B617 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav16d-dv11A0A075B617 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Trav16d-dv11A0A075B617 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav16d-dv11A0A075B617 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trav16d-dv11A0A075B617 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav16d-dv11A0A075B617 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav16d-dv11A0A075B617 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC13.01□□□□□ -0.33
Trav16d-dv11A0A075B617 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Trav16d-dv11A0A075B617 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav16d-dv11A0A075B617 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav16d-dv11A0A075B617 Gm19094-201ENSMUST00000209791 1246 ntBASIC13.01□□□□□ -0.33
Trav16d-dv11A0A075B617 AC137127.1-201ENSMUST00000213466 1078 ntBASIC13.01□□□□□ -0.33
Trav16d-dv11A0A075B617 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav16d-dv11A0A075B617 Gm5576-201ENSMUST00000075809 1236 ntBASIC13.01□□□□□ -0.33
Trav16d-dv11A0A075B617 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav16d-dv11A0A075B617 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC13.01□□□□□ -0.33
Trav16d-dv11A0A075B617 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav16d-dv11A0A075B617 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav16d-dv11A0A075B617 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav16d-dv11A0A075B617 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav16d-dv11A0A075B617 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Trav16d-dv11A0A075B617 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav16d-dv11A0A075B617 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav16d-dv11A0A075B617 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trav16d-dv11A0A075B617 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav16d-dv11A0A075B617 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav16d-dv11A0A075B617 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav16d-dv11A0A075B617 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav16d-dv11A0A075B617 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav16d-dv11A0A075B617 Gm37812-201ENSMUST00000195216 2475 ntBASIC13□□□□□ -0.33
Trav16d-dv11A0A075B617 Gm37519-201ENSMUST00000191687 2210 ntBASIC13□□□□□ -0.33
Trav16d-dv11A0A075B617 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav16d-dv11A0A075B617 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav16d-dv11A0A075B617 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav16d-dv11A0A075B617 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav16d-dv11A0A075B617 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC13□□□□□ -0.33
Trav16d-dv11A0A075B617 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC13□□□□□ -0.33
Trav16d-dv11A0A075B617 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 138.3 ms