Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav6-1A0A075B5Z8 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC14.27□□□□□ -0.12
Trav6-1A0A075B5Z8 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Trav6-1A0A075B5Z8 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC14.27□□□□□ -0.13
Trav6-1A0A075B5Z8 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Trav6-1A0A075B5Z8 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC14.27□□□□□ -0.13
Trav6-1A0A075B5Z8 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC14.27□□□□□ -0.13
Trav6-1A0A075B5Z8 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Trav6-1A0A075B5Z8 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6-1A0A075B5Z8 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6-1A0A075B5Z8 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6-1A0A075B5Z8 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6-1A0A075B5Z8 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6-1A0A075B5Z8 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6-1A0A075B5Z8 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-1A0A075B5Z8 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-1A0A075B5Z8 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trav6-1A0A075B5Z8 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-1A0A075B5Z8 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-1A0A075B5Z8 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-1A0A075B5Z8 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC14.26□□□□□ -0.13
Trav6-1A0A075B5Z8 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-1A0A075B5Z8 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC14.26□□□□□ -0.13
Trav6-1A0A075B5Z8 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-1A0A075B5Z8 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-1A0A075B5Z8 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-1A0A075B5Z8 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trav6-1A0A075B5Z8 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-1A0A075B5Z8 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.26□□□□□ -0.13
Trav6-1A0A075B5Z8 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-1A0A075B5Z8 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC14.26□□□□□ -0.13
Trav6-1A0A075B5Z8 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trav6-1A0A075B5Z8 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-1A0A075B5Z8 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-1A0A075B5Z8 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Trav6-1A0A075B5Z8 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-1A0A075B5Z8 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-1A0A075B5Z8 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-1A0A075B5Z8 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Trav6-1A0A075B5Z8 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Trav6-1A0A075B5Z8 Gm21168-201ENSMUST00000199646 1096 ntBASIC14.25□□□□□ -0.13
Trav6-1A0A075B5Z8 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC14.25□□□□□ -0.13
Trav6-1A0A075B5Z8 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-1A0A075B5Z8 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.25□□□□□ -0.13
Trav6-1A0A075B5Z8 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-1A0A075B5Z8 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-1A0A075B5Z8 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Trav6-1A0A075B5Z8 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-1A0A075B5Z8 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-1A0A075B5Z8 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trav6-1A0A075B5Z8 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.25□□□□□ -0.13
Trav6-1A0A075B5Z8 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-1A0A075B5Z8 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-1A0A075B5Z8 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-1A0A075B5Z8 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-1A0A075B5Z8 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.24□□□□□ -0.13
Trav6-1A0A075B5Z8 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trav6-1A0A075B5Z8 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-1A0A075B5Z8 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-1A0A075B5Z8 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC14.24□□□□□ -0.13
Trav6-1A0A075B5Z8 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-1A0A075B5Z8 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-1A0A075B5Z8 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-1A0A075B5Z8 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-1A0A075B5Z8 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-1A0A075B5Z8 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-1A0A075B5Z8 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Trav6-1A0A075B5Z8 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-1A0A075B5Z8 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-1A0A075B5Z8 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC14.23□□□□□ -0.13
Trav6-1A0A075B5Z8 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-1A0A075B5Z8 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-1A0A075B5Z8 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-1A0A075B5Z8 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-1A0A075B5Z8 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-1A0A075B5Z8 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-1A0A075B5Z8 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trav6-1A0A075B5Z8 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-1A0A075B5Z8 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC14.23□□□□□ -0.13
Trav6-1A0A075B5Z8 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Trav6-1A0A075B5Z8 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-1A0A075B5Z8 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-1A0A075B5Z8 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-1A0A075B5Z8 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-1A0A075B5Z8 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-1A0A075B5Z8 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-1A0A075B5Z8 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-1A0A075B5Z8 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trav6-1A0A075B5Z8 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-1A0A075B5Z8 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-1A0A075B5Z8 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-1A0A075B5Z8 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-1A0A075B5Z8 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trav6-1A0A075B5Z8 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Trav6-1A0A075B5Z8 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-1A0A075B5Z8 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-1A0A075B5Z8 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-1A0A075B5Z8 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-1A0A075B5Z8 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-1A0A075B5Z8 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms