Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trbv4A0A075B5I2 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trbv4A0A075B5I2 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trbv4A0A075B5I2 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.77■□□□□ 0.44
Trbv4A0A075B5I2 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trbv4A0A075B5I2 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trbv4A0A075B5I2 Gm11249-201ENSMUST00000117071 859 ntBASIC17.77■□□□□ 0.44
Trbv4A0A075B5I2 Mir6349-201ENSMUST00000184059 97 ntBASIC17.77■□□□□ 0.44
Trbv4A0A075B5I2 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.77■□□□□ 0.44
Trbv4A0A075B5I2 Gm10138-203ENSMUST00000206952 366 ntBASIC17.77■□□□□ 0.44
Trbv4A0A075B5I2 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Trbv4A0A075B5I2 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Trbv4A0A075B5I2 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trbv4A0A075B5I2 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trbv4A0A075B5I2 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.43
Trbv4A0A075B5I2 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trbv4A0A075B5I2 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trbv4A0A075B5I2 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trbv4A0A075B5I2 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trbv4A0A075B5I2 Mir8112-201ENSMUST00000184382 131 ntBASIC17.76■□□□□ 0.43
Trbv4A0A075B5I2 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trbv4A0A075B5I2 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trbv4A0A075B5I2 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.76■□□□□ 0.43
Trbv4A0A075B5I2 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trbv4A0A075B5I2 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trbv4A0A075B5I2 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trbv4A0A075B5I2 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.76■□□□□ 0.43
Trbv4A0A075B5I2 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.76■□□□□ 0.43
Trbv4A0A075B5I2 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trbv4A0A075B5I2 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Trbv4A0A075B5I2 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trbv4A0A075B5I2 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Trbv4A0A075B5I2 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.75■□□□□ 0.43
Trbv4A0A075B5I2 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trbv4A0A075B5I2 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trbv4A0A075B5I2 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.75■□□□□ 0.43
Trbv4A0A075B5I2 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trbv4A0A075B5I2 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trbv4A0A075B5I2 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trbv4A0A075B5I2 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trbv4A0A075B5I2 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trbv4A0A075B5I2 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trbv4A0A075B5I2 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trbv4A0A075B5I2 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Trbv4A0A075B5I2 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trbv4A0A075B5I2 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
Trbv4A0A075B5I2 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.74■□□□□ 0.43
Trbv4A0A075B5I2 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.74■□□□□ 0.43
Trbv4A0A075B5I2 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trbv4A0A075B5I2 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
Trbv4A0A075B5I2 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trbv4A0A075B5I2 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.74■□□□□ 0.43
Trbv4A0A075B5I2 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Trbv4A0A075B5I2 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trbv4A0A075B5I2 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Trbv4A0A075B5I2 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv4A0A075B5I2 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Trbv4A0A075B5I2 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv4A0A075B5I2 Gm13401-201ENSMUST00000117074 291 ntBASIC17.73■□□□□ 0.43
Trbv4A0A075B5I2 Gm15375-201ENSMUST00000119510 849 ntBASIC17.73■□□□□ 0.43
Trbv4A0A075B5I2 Gm12441-201ENSMUST00000121806 588 ntBASIC17.73■□□□□ 0.43
Trbv4A0A075B5I2 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv4A0A075B5I2 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv4A0A075B5I2 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv4A0A075B5I2 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.73■□□□□ 0.43
Trbv4A0A075B5I2 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv4A0A075B5I2 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv4A0A075B5I2 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv4A0A075B5I2 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv4A0A075B5I2 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv4A0A075B5I2 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv4A0A075B5I2 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.72■□□□□ 0.43
Trbv4A0A075B5I2 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv4A0A075B5I2 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv4A0A075B5I2 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv4A0A075B5I2 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv4A0A075B5I2 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv4A0A075B5I2 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv4A0A075B5I2 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv4A0A075B5I2 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv4A0A075B5I2 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv4A0A075B5I2 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv4A0A075B5I2 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.72■□□□□ 0.43
Trbv4A0A075B5I2 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv4A0A075B5I2 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv4A0A075B5I2 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.72■□□□□ 0.43
Trbv4A0A075B5I2 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv4A0A075B5I2 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv4A0A075B5I2 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv4A0A075B5I2 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv4A0A075B5I2 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv4A0A075B5I2 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv4A0A075B5I2 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv4A0A075B5I2 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv4A0A075B5I2 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv4A0A075B5I2 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv4A0A075B5I2 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv4A0A075B5I2 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv4A0A075B5I2 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.71■□□□□ 0.43
Trbv4A0A075B5I2 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms