Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Olfr228-202ENSMUST00000217292 1854 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Gm22774-201ENSMUST00000102084 109 ntBASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Ighv14-1-201ENSMUST00000103463 351 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Trdv2-2-201ENSMUST00000103678 397 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Gm25311-201ENSMUST00000104136 132 ntBASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Gm25379-201ENSMUST00000104338 114 ntBASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Gm25631-201ENSMUST00000104390 130 ntBASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Gm14510-201ENSMUST00000116165 1092 ntBASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Gm14909-201ENSMUST00000117853 351 ntBASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Eif3s6-ps1-201ENSMUST00000117907 470 ntBASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Gm16418-201ENSMUST00000118577 171 ntBASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Gm13013-201ENSMUST00000119087 523 ntBASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Gm14852-201ENSMUST00000120065 647 ntBASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Gm15158-201ENSMUST00000120577 570 ntBASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Gm11321-201ENSMUST00000121257 902 ntBASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Gm14847-201ENSMUST00000121978 519 ntBASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Gm25781-201ENSMUST00000122527 84 ntBASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Gm16248-201ENSMUST00000124238 243 ntBASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Gm23027-201ENSMUST00000158771 158 ntBASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Mir1930-201ENSMUST00000158799 84 ntBASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Trim39Q9ESN2 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC6.24□□□□□ -1.41
Trim39Q9ESN2 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Trim39Q9ESN2 A730017C20Rik-206ENSMUST00000175830 731 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Obox3-ps8-201ENSMUST00000177182 960 ntBASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Gm23018-201ENSMUST00000177928 109 ntBASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Gm8192-201ENSMUST00000182196 958 ntBASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Nabp1-206ENSMUST00000188051 680 ntTSL 3 BASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Gm8883-202ENSMUST00000188258 545 ntTSL 3 BASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Gm29349-201ENSMUST00000188692 174 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Gm20162-201ENSMUST00000193629 871 ntBASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Gm9710-201ENSMUST00000198053 499 ntBASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Gm43436-201ENSMUST00000199308 147 ntBASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Ccl24-202ENSMUST00000201401 561 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Gm43964-201ENSMUST00000203570 301 ntTSL 3 BASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Gm5324-201ENSMUST00000208115 476 ntBASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Gm19092-201ENSMUST00000209036 969 ntBASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Gm38430-201ENSMUST00000209888 1240 ntBASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Gm18891-201ENSMUST00000216734 1087 ntBASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Gm3442-201ENSMUST00000216808 710 ntBASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Gm3266-201ENSMUST00000217832 591 ntBASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Gm20304-201ENSMUST00000218168 444 ntBASIC6.24□□□□□ -1.41
Trim39Q9ESN2 AC122539.1-201ENSMUST00000219925 329 ntBASIC6.24□□□□□ -1.41
Trim39Q9ESN2 AC192333.6-201ENSMUST00000224565 725 ntBASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Bglap3-201ENSMUST00000075523 717 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Gm23093-201ENSMUST00000083450 102 ntBASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Rnase6-201ENSMUST00000095923 1072 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Hc-201ENSMUST00000028233 5445 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Fbxw22-201ENSMUST00000080626 1835 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Ap4e1-201ENSMUST00000002063 4600 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Gm21123-201ENSMUST00000210822 1734 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Trim39Q9ESN2 Slamf1-201ENSMUST00000015460 2693 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Trim39Q9ESN2 Gm6614-203ENSMUST00000181791 2450 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
Trim39Q9ESN2 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC6.23□□□□□ -1.41
Trim39Q9ESN2 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
Trim39Q9ESN2 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Trim39Q9ESN2 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Trim39Q9ESN2 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
Trim39Q9ESN2 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Trim39Q9ESN2 Papola-215ENSMUST00000170002 2605 ntTSL 5 BASIC6.23□□□□□ -1.41
Trim39Q9ESN2 Mrpl48-208ENSMUST00000150042 4285 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Trim39Q9ESN2 Mir760-201ENSMUST00000103257 119 ntBASIC6.23□□□□□ -1.41
Trim39Q9ESN2 H2al2a-201ENSMUST00000105001 542 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Trim39Q9ESN2 Fxyd1-203ENSMUST00000108110 492 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Trim39Q9ESN2 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Trim39Q9ESN2 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms