Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm6503-201ENSMUST00000210829 2225 ntBASIC5.8□□□□□ -1.48
Smc1aQ9CU62 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC5.8□□□□□ -1.48
Smc1aQ9CU62 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Smc1aQ9CU62 Gm13590-201ENSMUST00000120183 1588 ntBASIC5.8□□□□□ -1.48
Smc1aQ9CU62 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
Smc1aQ9CU62 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Smc1aQ9CU62 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Smc1aQ9CU62 Gm44248-201ENSMUST00000203079 1549 ntBASIC5.8□□□□□ -1.48
Smc1aQ9CU62 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Smc1aQ9CU62 Gm26523-201ENSMUST00000180713 1658 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Smc1aQ9CU62 Zfp352-201ENSMUST00000080541 1656 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Smc1aQ9CU62 Gm11550-201ENSMUST00000118210 699 ntBASIC5.8□□□□□ -1.48
Smc1aQ9CU62 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC5.8□□□□□ -1.48
Smc1aQ9CU62 Gm12288-201ENSMUST00000121054 1282 ntBASIC5.8□□□□□ -1.48
Smc1aQ9CU62 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Smc1aQ9CU62 Gm3053-201ENSMUST00000161709 616 ntBASIC5.8□□□□□ -1.48
Smc1aQ9CU62 Mir7056-201ENSMUST00000183776 59 ntBASIC5.8□□□□□ -1.48
Smc1aQ9CU62 Gm28385-201ENSMUST00000185671 292 ntBASIC5.8□□□□□ -1.48
Smc1aQ9CU62 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC5.8□□□□□ -1.48
Smc1aQ9CU62 Gm37421-201ENSMUST00000193088 132 ntBASIC5.8□□□□□ -1.48
Smc1aQ9CU62 9330198I05Rik-201ENSMUST00000196846 1095 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Smc1aQ9CU62 Gm4410-201ENSMUST00000199349 686 ntBASIC5.8□□□□□ -1.48
Smc1aQ9CU62 Gm45422-201ENSMUST00000211476 246 ntBASIC5.8□□□□□ -1.48
Smc1aQ9CU62 Gm18541-201ENSMUST00000215935 538 ntBASIC5.8□□□□□ -1.48
Smc1aQ9CU62 Gm5176-201ENSMUST00000218244 1227 ntBASIC5.8□□□□□ -1.48
Smc1aQ9CU62 CT025616.1-201ENSMUST00000221158 412 ntBASIC5.8□□□□□ -1.48
Smc1aQ9CU62 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Smc1aQ9CU62 Gm4963-201ENSMUST00000072718 378 ntBASIC5.8□□□□□ -1.48
Smc1aQ9CU62 Vmn1r71-202ENSMUST00000226874 5194 ntAPPRIS P2 BASIC5.8□□□□□ -1.48
Smc1aQ9CU62 Olfr1286-203ENSMUST00000213210 3740 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Smc1aQ9CU62 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Smc1aQ9CU62 Olfr1270-205ENSMUST00000216354 4836 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Smc1aQ9CU62 Olfr947-ps1-201ENSMUST00000214075 2165 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
Smc1aQ9CU62 Gm43027-201ENSMUST00000202906 3691 ntBASIC5.8□□□□□ -1.48
Smc1aQ9CU62 Vmn1r87-203ENSMUST00000227443 5319 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Smc1aQ9CU62 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Smc1aQ9CU62 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Smc1aQ9CU62 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Smc1aQ9CU62 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Smc1aQ9CU62 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Smc1aQ9CU62 Gm3962-201ENSMUST00000173027 2587 ntBASIC5.79□□□□□ -1.48
Smc1aQ9CU62 Gm43426-201ENSMUST00000197287 2597 ntBASIC5.79□□□□□ -1.48
Smc1aQ9CU62 Serpina1f-203ENSMUST00000118101 1453 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Smc1aQ9CU62 Olfr47-202ENSMUST00000215569 1603 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Smc1aQ9CU62 Ppih-202ENSMUST00000106317 613 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Smc1aQ9CU62 Gm13503-201ENSMUST00000119017 446 ntBASIC5.79□□□□□ -1.48
Smc1aQ9CU62 Gm13610-201ENSMUST00000128298 951 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Smc1aQ9CU62 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Smc1aQ9CU62 Gm15534-201ENSMUST00000137642 562 ntBASIC5.79□□□□□ -1.48
Smc1aQ9CU62 Olfr1038-ps-201ENSMUST00000149775 1209 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Smc1aQ9CU62 Gm28660-201ENSMUST00000186496 253 ntBASIC5.79□□□□□ -1.48
Smc1aQ9CU62 1700029B22Rik-202ENSMUST00000186532 694 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Smc1aQ9CU62 Gm5058-201ENSMUST00000187331 463 ntBASIC5.79□□□□□ -1.48
Smc1aQ9CU62 Gm8480-201ENSMUST00000190350 698 ntBASIC5.79□□□□□ -1.48
Smc1aQ9CU62 Gm20239-201ENSMUST00000196610 982 ntBASIC5.79□□□□□ -1.48
Smc1aQ9CU62 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Smc1aQ9CU62 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Smc1aQ9CU62 Abca15-204ENSMUST00000207220 567 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Smc1aQ9CU62 Olfr712-ps1-201ENSMUST00000207690 950 ntBASIC5.79□□□□□ -1.48
Smc1aQ9CU62 Gm46430-203ENSMUST00000221389 1049 ntTSL 5 BASIC5.79□□□□□ -1.48
Smc1aQ9CU62 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC5.79□□□□□ -1.48
Smc1aQ9CU62 CT010486.1-201ENSMUST00000224609 422 ntBASIC5.79□□□□□ -1.48
Smc1aQ9CU62 AC154335.1-201ENSMUST00000224744 395 ntBASIC5.79□□□□□ -1.48
Smc1aQ9CU62 1700129C05Rik-201ENSMUST00000022548 1067 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Smc1aQ9CU62 AC124549.1-201ENSMUST00000225912 333 ntBASIC5.79□□□□□ -1.48
Smc1aQ9CU62 Pbsn-201ENSMUST00000000003 902 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Smc1aQ9CU62 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Smc1aQ9CU62 Gm37357-201ENSMUST00000192386 3123 ntBASIC5.79□□□□□ -1.48
Smc1aQ9CU62 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Smc1aQ9CU62 Olfr813-202ENSMUST00000204622 2410 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Smc1aQ9CU62 Akr1c14-201ENSMUST00000041768 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Smc1aQ9CU62 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC5.79□□□□□ -1.48
Smc1aQ9CU62 Olfr303-203ENSMUST00000215532 3572 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Smc1aQ9CU62 Olfr391-ps-201ENSMUST00000214485 2080 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
Smc1aQ9CU62 AC123705.3-201ENSMUST00000223531 2069 ntBASIC5.79□□□□□ -1.48
Smc1aQ9CU62 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC5.79□□□□□ -1.48
Smc1aQ9CU62 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Smc1aQ9CU62 Gm37250-201ENSMUST00000194919 2388 ntBASIC5.79□□□□□ -1.48
Smc1aQ9CU62 Inpp4b-209ENSMUST00000172031 8067 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Smc1aQ9CU62 Ceacam15-201ENSMUST00000108498 1391 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Smc1aQ9CU62 AC122357.1-201ENSMUST00000221652 1515 ntBASIC5.79□□□□□ -1.48
Smc1aQ9CU62 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Smc1aQ9CU62 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Smc1aQ9CU62 Olfr1299-201ENSMUST00000207228 1678 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
Smc1aQ9CU62 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Smc1aQ9CU62 March1-203ENSMUST00000098708 4000 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
Smc1aQ9CU62 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Smc1aQ9CU62 Olfr362-202ENSMUST00000213817 4059 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Smc1aQ9CU62 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Smc1aQ9CU62 Adgrv1-201ENSMUST00000095585 19338 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Smc1aQ9CU62 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Smc1aQ9CU62 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Smc1aQ9CU62 Traj7-201ENSMUST00000103733 59 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Smc1aQ9CU62 Gm13755-201ENSMUST00000118509 305 ntBASIC5.78□□□□□ -1.48
Smc1aQ9CU62 Olfr637-ps1-201ENSMUST00000120386 471 ntBASIC5.78□□□□□ -1.48
Smc1aQ9CU62 Gm14620-201ENSMUST00000120656 383 ntBASIC5.78□□□□□ -1.48
Smc1aQ9CU62 Gm12256-201ENSMUST00000132394 446 ntTSL 3 BASIC5.78□□□□□ -1.48
Smc1aQ9CU62 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC5.78□□□□□ -1.48
Smc1aQ9CU62 Gm26350-201ENSMUST00000157531 288 ntBASIC5.78□□□□□ -1.48
Smc1aQ9CU62 Gm15812-201ENSMUST00000162331 748 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms