Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Gm13787-201ENSMUST00000120422 168 ntBASIC5.22□□□□□ -1.57
Rpa3Q9CQ71 Gm22343-201ENSMUST00000122648 286 ntBASIC5.22□□□□□ -1.57
Rpa3Q9CQ71 C030037F17Rik-201ENSMUST00000155211 406 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Rpa3Q9CQ71 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC5.22□□□□□ -1.57
Rpa3Q9CQ71 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Rpa3Q9CQ71 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Rpa3Q9CQ71 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
Rpa3Q9CQ71 Gm17081-201ENSMUST00000167363 478 ntBASIC5.22□□□□□ -1.57
Rpa3Q9CQ71 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC5.22□□□□□ -1.57
Rpa3Q9CQ71 Gm37884-201ENSMUST00000191857 818 ntBASIC5.22□□□□□ -1.57
Rpa3Q9CQ71 Gm20940-201ENSMUST00000197308 360 ntBASIC5.22□□□□□ -1.57
Rpa3Q9CQ71 Gm42663-201ENSMUST00000199883 351 ntBASIC5.22□□□□□ -1.57
Rpa3Q9CQ71 Gm43418-201ENSMUST00000201334 428 ntBASIC5.22□□□□□ -1.57
Rpa3Q9CQ71 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Rpa3Q9CQ71 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC5.22□□□□□ -1.57
Rpa3Q9CQ71 Gm18011-201ENSMUST00000203717 565 ntBASIC5.22□□□□□ -1.57
Rpa3Q9CQ71 Gm45083-201ENSMUST00000205216 712 ntTSL 3 BASIC5.22□□□□□ -1.57
Rpa3Q9CQ71 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC5.22□□□□□ -1.57
Rpa3Q9CQ71 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC5.22□□□□□ -1.57
Rpa3Q9CQ71 Gm6049-201ENSMUST00000222369 458 ntBASIC5.22□□□□□ -1.57
Rpa3Q9CQ71 Gm7822-201ENSMUST00000222433 581 ntBASIC5.22□□□□□ -1.57
Rpa3Q9CQ71 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Rpa3Q9CQ71 Olfr792-201ENSMUST00000076575 936 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Rpa3Q9CQ71 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Rpa3Q9CQ71 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Rpa3Q9CQ71 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Rpa3Q9CQ71 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Rpa3Q9CQ71 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Rpa3Q9CQ71 Mtm1-213ENSMUST00000171933 3488 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Rpa3Q9CQ71 Olfr1290-204ENSMUST00000217611 2729 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
Rpa3Q9CQ71 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Rpa3Q9CQ71 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC5.22□□□□□ -1.57
Rpa3Q9CQ71 AC115970.1-201ENSMUST00000218910 1758 ntBASIC5.21□□□□□ -1.57
Rpa3Q9CQ71 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.57
Rpa3Q9CQ71 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Rpa3Q9CQ71 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.57
Rpa3Q9CQ71 AC139218.1-201ENSMUST00000228215 4287 ntBASIC5.21□□□□□ -1.57
Rpa3Q9CQ71 Slfn14-201ENSMUST00000163961 3706 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Rpa3Q9CQ71 Olfr300-ps1-201ENSMUST00000174262 2395 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
Rpa3Q9CQ71 AA792892-201ENSMUST00000097477 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Rpa3Q9CQ71 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.58
Rpa3Q9CQ71 Zscan4e-202ENSMUST00000210521 1745 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Rpa3Q9CQ71 Ago2-201ENSMUST00000044113 13705 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Rpa3Q9CQ71 Gm42548-201ENSMUST00000202669 3933 ntBASIC5.21□□□□□ -1.58
Rpa3Q9CQ71 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Rpa3Q9CQ71 Gm11409-201ENSMUST00000118621 403 ntBASIC5.21□□□□□ -1.58
Rpa3Q9CQ71 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Rpa3Q9CQ71 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC5.21□□□□□ -1.58
Rpa3Q9CQ71 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC5.21□□□□□ -1.58
Rpa3Q9CQ71 Gm27543-201ENSMUST00000183562 177 ntBASIC5.21□□□□□ -1.58
Rpa3Q9CQ71 Gm38180-201ENSMUST00000192381 395 ntTSL 5 BASIC5.21□□□□□ -1.58
Rpa3Q9CQ71 Ighv1-3-201ENSMUST00000192764 302 ntBASIC5.21□□□□□ -1.58
Rpa3Q9CQ71 Gm18325-201ENSMUST00000203228 835 ntBASIC5.21□□□□□ -1.58
Rpa3Q9CQ71 Gm43968-201ENSMUST00000203388 389 ntBASIC5.21□□□□□ -1.58
Rpa3Q9CQ71 Olfr494-201ENSMUST00000209743 1002 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
Rpa3Q9CQ71 Olfr494-202ENSMUST00000210291 947 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Rpa3Q9CQ71 AC152979.3-201ENSMUST00000217720 479 ntBASIC5.21□□□□□ -1.58
Rpa3Q9CQ71 AC134439.2-201ENSMUST00000221950 467 ntBASIC5.21□□□□□ -1.58
Rpa3Q9CQ71 Gm41002-201ENSMUST00000222479 312 ntTSL 3 BASIC5.21□□□□□ -1.58
Rpa3Q9CQ71 Gm7040-201ENSMUST00000223271 443 ntBASIC5.21□□□□□ -1.58
Rpa3Q9CQ71 AC152169.2-201ENSMUST00000224558 613 ntBASIC5.21□□□□□ -1.58
Rpa3Q9CQ71 Desi2-202ENSMUST00000069568 1193 ntBASIC5.21□□□□□ -1.58
Rpa3Q9CQ71 Olfr749-201ENSMUST00000074674 1016 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
Rpa3Q9CQ71 Olfr199-201ENSMUST00000099657 931 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Rpa3Q9CQ71 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC5.21□□□□□ -1.58
Rpa3Q9CQ71 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Rpa3Q9CQ71 Gm37703-201ENSMUST00000192292 1784 ntBASIC5.21□□□□□ -1.58
Rpa3Q9CQ71 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC5.21□□□□□ -1.58
Rpa3Q9CQ71 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Rpa3Q9CQ71 Olfr1299-201ENSMUST00000207228 1678 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
Rpa3Q9CQ71 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Rpa3Q9CQ71 Gm38020-201ENSMUST00000193066 4676 ntBASIC5.21□□□□□ -1.58
Rpa3Q9CQ71 Gm43887-201ENSMUST00000204727 3186 ntBASIC5.2□□□□□ -1.58
Rpa3Q9CQ71 Slco1b2-201ENSMUST00000042812 3307 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Rpa3Q9CQ71 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Rpa3Q9CQ71 Gm45129-201ENSMUST00000208444 2224 ntBASIC5.2□□□□□ -1.58
Rpa3Q9CQ71 Pnpla8-204ENSMUST00000143771 2974 ntTSL 5 BASIC5.2□□□□□ -1.58
Rpa3Q9CQ71 Gm42869-201ENSMUST00000199953 2121 ntBASIC5.2□□□□□ -1.58
Rpa3Q9CQ71 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Rpa3Q9CQ71 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Rpa3Q9CQ71 Gm3267-201ENSMUST00000118671 473 ntBASIC5.2□□□□□ -1.58
Rpa3Q9CQ71 Gm11894-201ENSMUST00000121579 328 ntBASIC5.2□□□□□ -1.58
Rpa3Q9CQ71 Gm12752-201ENSMUST00000121657 811 ntBASIC5.2□□□□□ -1.58
Rpa3Q9CQ71 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC5.2□□□□□ -1.58
Rpa3Q9CQ71 Gm26490-201ENSMUST00000157879 140 ntBASIC5.2□□□□□ -1.58
Rpa3Q9CQ71 Gm24931-201ENSMUST00000158324 107 ntBASIC5.2□□□□□ -1.58
Rpa3Q9CQ71 Gm5777-201ENSMUST00000177265 448 ntBASIC5.2□□□□□ -1.58
Rpa3Q9CQ71 Tceanc-203ENSMUST00000180322 1080 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Rpa3Q9CQ71 Gm28769-201ENSMUST00000190176 615 ntBASIC5.2□□□□□ -1.58
Rpa3Q9CQ71 Gm44648-201ENSMUST00000208267 329 ntBASIC5.2□□□□□ -1.58
Rpa3Q9CQ71 AC153729.4-201ENSMUST00000217582 3826 ntBASIC5.2□□□□□ -1.58
Rpa3Q9CQ71 AC161114.1-201ENSMUST00000218223 474 ntBASIC5.2□□□□□ -1.58
Rpa3Q9CQ71 Gm36372-201ENSMUST00000221011 778 ntTSL 5 BASIC5.2□□□□□ -1.58
Rpa3Q9CQ71 Olfr1497-201ENSMUST00000061993 945 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Rpa3Q9CQ71 Olfr1459-202ENSMUST00000213493 8854 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Rpa3Q9CQ71 Gm44535-201ENSMUST00000208889 3136 ntBASIC5.2□□□□□ -1.58
Rpa3Q9CQ71 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Rpa3Q9CQ71 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Rpa3Q9CQ71 Gm38243-201ENSMUST00000194737 1567 ntBASIC5.2□□□□□ -1.58
Rpa3Q9CQ71 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms