Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Cstf3Q99LI7 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Cstf3Q99LI7 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Cstf3Q99LI7 Galnt1-208ENSMUST00000178605 3796 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Cstf3Q99LI7 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Cstf3Q99LI7 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC5.15□□□□□ -1.59
Cstf3Q99LI7 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC5.15□□□□□ -1.59
Cstf3Q99LI7 Gm7970-201ENSMUST00000167615 1403 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Cstf3Q99LI7 Gm7980-201ENSMUST00000168107 1403 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Cstf3Q99LI7 Gm37789-201ENSMUST00000192862 2889 ntBASIC5.14□□□□□ -1.59
Cstf3Q99LI7 Cntnap5b-201ENSMUST00000086738 4027 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
Cstf3Q99LI7 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Cstf3Q99LI7 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Cstf3Q99LI7 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
Cstf3Q99LI7 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Cstf3Q99LI7 AC153494.1-201ENSMUST00000218664 3041 ntBASIC5.14□□□□□ -1.59
Cstf3Q99LI7 Ranbp3l-201ENSMUST00000053308 3017 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Cstf3Q99LI7 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Cstf3Q99LI7 Gm14790-201ENSMUST00000117760 1293 ntBASIC5.14□□□□□ -1.59
Cstf3Q99LI7 Gm14599-201ENSMUST00000120469 474 ntBASIC5.14□□□□□ -1.59
Cstf3Q99LI7 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC5.14□□□□□ -1.59
Cstf3Q99LI7 2010013B24Rik-201ENSMUST00000126922 747 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Cstf3Q99LI7 Gm24719-201ENSMUST00000157520 110 ntBASIC5.14□□□□□ -1.59
Cstf3Q99LI7 Gm23115-201ENSMUST00000158480 108 ntBASIC5.14□□□□□ -1.59
Cstf3Q99LI7 Gm16300-201ENSMUST00000160031 1279 ntBASIC5.14□□□□□ -1.59
Cstf3Q99LI7 Samd15-201ENSMUST00000169669 1194 ntBASIC5.14□□□□□ -1.59
Cstf3Q99LI7 Gm21882-201ENSMUST00000178332 1083 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Cstf3Q99LI7 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Cstf3Q99LI7 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Cstf3Q99LI7 Gm26665-201ENSMUST00000181378 839 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Cstf3Q99LI7 Gm4221-201ENSMUST00000181538 1232 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Cstf3Q99LI7 Mir7211-201ENSMUST00000184071 63 ntBASIC5.14□□□□□ -1.59
Cstf3Q99LI7 Gm29534-201ENSMUST00000187328 382 ntBASIC5.14□□□□□ -1.59
Cstf3Q99LI7 Olfr1246-201ENSMUST00000187990 1078 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Cstf3Q99LI7 Gm29376-201ENSMUST00000189357 835 ntBASIC5.14□□□□□ -1.59
Cstf3Q99LI7 Gm38015-201ENSMUST00000193048 188 ntBASIC5.14□□□□□ -1.59
Cstf3Q99LI7 2610012C04Rik-201ENSMUST00000193434 1023 ntBASIC5.14□□□□□ -1.59
Cstf3Q99LI7 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC5.14□□□□□ -1.59
Cstf3Q99LI7 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC5.14□□□□□ -1.59
Cstf3Q99LI7 Ube2l3-ps1-201ENSMUST00000199777 436 ntBASIC5.14□□□□□ -1.59
Cstf3Q99LI7 n-TStga1-201ENSMUST00000199903 109 ntBASIC5.14□□□□□ -1.59
Cstf3Q99LI7 Alox5ap-203ENSMUST00000200928 356 ntTSL 3 BASIC5.14□□□□□ -1.59
Cstf3Q99LI7 Gm43967-201ENSMUST00000203787 301 ntBASIC5.14□□□□□ -1.59
Cstf3Q99LI7 Gm44074-201ENSMUST00000204562 337 ntBASIC5.14□□□□□ -1.59
Cstf3Q99LI7 Gm44277-201ENSMUST00000205128 649 ntBASIC5.14□□□□□ -1.59
Cstf3Q99LI7 Gm3257-201ENSMUST00000207217 675 ntBASIC5.14□□□□□ -1.59
Cstf3Q99LI7 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC5.14□□□□□ -1.59
Cstf3Q99LI7 Gm7435-201ENSMUST00000214039 486 ntTSL 2 BASIC5.14□□□□□ -1.59
Cstf3Q99LI7 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Cstf3Q99LI7 Gm18996-201ENSMUST00000214851 755 ntBASIC5.14□□□□□ -1.59
Cstf3Q99LI7 AC134254.2-201ENSMUST00000221262 170 ntBASIC5.14□□□□□ -1.59
Cstf3Q99LI7 AC160980.2-201ENSMUST00000225131 949 ntBASIC5.14□□□□□ -1.59
Cstf3Q99LI7 AC114572.1-201ENSMUST00000227262 300 ntBASIC5.14□□□□□ -1.59
Cstf3Q99LI7 Gm26203-201ENSMUST00000082911 114 ntBASIC5.14□□□□□ -1.59
Cstf3Q99LI7 Boll-201ENSMUST00000087585 882 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Cstf3Q99LI7 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
Cstf3Q99LI7 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Cstf3Q99LI7 Snhg14-214ENSMUST00000191191 3991 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Cstf3Q99LI7 March1-203ENSMUST00000098708 4000 ntAPPRIS P3 TSL 5 BASIC5.14□□□□□ -1.59
Cstf3Q99LI7 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Cstf3Q99LI7 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Cstf3Q99LI7 Gm29112-201ENSMUST00000188962 3487 ntBASIC5.14□□□□□ -1.59
Cstf3Q99LI7 Ogt-202ENSMUST00000119299 3840 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
Cstf3Q99LI7 Vps41-201ENSMUST00000072961 3199 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Cstf3Q99LI7 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Cstf3Q99LI7 Gm37890-201ENSMUST00000195610 3992 ntBASIC5.14□□□□□ -1.59
Cstf3Q99LI7 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Cstf3Q99LI7 Gm43027-201ENSMUST00000202906 3691 ntBASIC5.13□□□□□ -1.59
Cstf3Q99LI7 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
Cstf3Q99LI7 Gm42949-201ENSMUST00000197054 2202 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Cstf3Q99LI7 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC5.13□□□□□ -1.59
Cstf3Q99LI7 Gm42841-201ENSMUST00000199806 1932 ntBASIC5.13□□□□□ -1.59
Cstf3Q99LI7 Olfr890-202ENSMUST00000213458 5475 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Cstf3Q99LI7 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Cstf3Q99LI7 Olfr1307-201ENSMUST00000099604 15582 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Cstf3Q99LI7 Olfr57-202ENSMUST00000203906 1647 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Cstf3Q99LI7 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC5.13□□□□□ -1.59
Cstf3Q99LI7 Zfp799-201ENSMUST00000179695 5833 ntTSL 3 BASIC5.13□□□□□ -1.59
Cstf3Q99LI7 Gm43283-201ENSMUST00000199138 2548 ntBASIC5.13□□□□□ -1.59
Cstf3Q99LI7 Gm25647-201ENSMUST00000101832 78 ntBASIC5.13□□□□□ -1.59
Cstf3Q99LI7 Gm25823-201ENSMUST00000101995 78 ntBASIC5.13□□□□□ -1.59
Cstf3Q99LI7 Gm25422-201ENSMUST00000104219 129 ntBASIC5.13□□□□□ -1.59
Cstf3Q99LI7 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC5.13□□□□□ -1.59
Cstf3Q99LI7 Gm11971-201ENSMUST00000117715 288 ntBASIC5.13□□□□□ -1.59
Cstf3Q99LI7 Gm15531-201ENSMUST00000118062 252 ntBASIC5.13□□□□□ -1.59
Cstf3Q99LI7 Gm11212-201ENSMUST00000118337 618 ntBASIC5.13□□□□□ -1.59
Cstf3Q99LI7 Gm12577-201ENSMUST00000119701 574 ntBASIC5.13□□□□□ -1.59
Cstf3Q99LI7 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC5.13□□□□□ -1.59
Cstf3Q99LI7 Gm23211-201ENSMUST00000122717 308 ntBASIC5.13□□□□□ -1.59
Cstf3Q99LI7 Snora81-201ENSMUST00000157310 178 ntBASIC5.13□□□□□ -1.59
Cstf3Q99LI7 Gm25430-201ENSMUST00000157614 289 ntBASIC5.13□□□□□ -1.59
Cstf3Q99LI7 Gm26352-201ENSMUST00000158223 125 ntBASIC5.13□□□□□ -1.59
Cstf3Q99LI7 Gm25861-201ENSMUST00000158251 109 ntBASIC5.13□□□□□ -1.59
Cstf3Q99LI7 Gm22158-201ENSMUST00000158411 126 ntBASIC5.13□□□□□ -1.59
Cstf3Q99LI7 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC5.13□□□□□ -1.59
Cstf3Q99LI7 Gm24220-201ENSMUST00000177753 79 ntBASIC5.13□□□□□ -1.59
Cstf3Q99LI7 Gm25988-201ENSMUST00000177759 79 ntBASIC5.13□□□□□ -1.59
Cstf3Q99LI7 Gm23471-201ENSMUST00000177886 79 ntBASIC5.13□□□□□ -1.59
Cstf3Q99LI7 Gm26488-201ENSMUST00000178225 79 ntBASIC5.13□□□□□ -1.59
Cstf3Q99LI7 Gm23449-201ENSMUST00000179208 79 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 140.8 ms