Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Ccdc28aQ8CEI3 Fmo2-201ENSMUST00000045902 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Ccdc28aQ8CEI3 Desi2-202ENSMUST00000069568 1193 ntBASIC5.1□□□□□ -1.59
Ccdc28aQ8CEI3 Olfr1407-ps1-201ENSMUST00000085885 797 ntBASIC5.1□□□□□ -1.59
Ccdc28aQ8CEI3 Rgs5-201ENSMUST00000027997 4096 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Ccdc28aQ8CEI3 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
Ccdc28aQ8CEI3 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Ccdc28aQ8CEI3 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Ccdc28aQ8CEI3 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Ccdc28aQ8CEI3 Olfr753-ps1-204ENSMUST00000219487 2956 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Ccdc28aQ8CEI3 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Ccdc28aQ8CEI3 Gm42583-201ENSMUST00000202678 6700 ntBASIC5.09□□□□□ -1.59
Ccdc28aQ8CEI3 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC5.09□□□□□ -1.59
Ccdc28aQ8CEI3 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Ccdc28aQ8CEI3 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Ccdc28aQ8CEI3 Gm15624-203ENSMUST00000204811 3402 ntBASIC5.09□□□□□ -1.59
Ccdc28aQ8CEI3 Gm23750-201ENSMUST00000104222 132 ntBASIC5.09□□□□□ -1.59
Ccdc28aQ8CEI3 Gm5725-201ENSMUST00000105195 924 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Ccdc28aQ8CEI3 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
Ccdc28aQ8CEI3 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
Ccdc28aQ8CEI3 Gm12893-201ENSMUST00000121732 275 ntBASIC5.09□□□□□ -1.59
Ccdc28aQ8CEI3 Gm22725-201ENSMUST00000158092 110 ntBASIC5.09□□□□□ -1.59
Ccdc28aQ8CEI3 Gm23069-201ENSMUST00000158240 311 ntBASIC5.09□□□□□ -1.59
Ccdc28aQ8CEI3 Vmn1r129-201ENSMUST00000165961 924 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Ccdc28aQ8CEI3 Gm8720-201ENSMUST00000168392 924 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Ccdc28aQ8CEI3 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC5.09□□□□□ -1.59
Ccdc28aQ8CEI3 Mir6416-201ENSMUST00000183664 117 ntBASIC5.09□□□□□ -1.59
Ccdc28aQ8CEI3 Mir6989-201ENSMUST00000184812 65 ntBASIC5.09□□□□□ -1.59
Ccdc28aQ8CEI3 Gm37884-201ENSMUST00000191857 818 ntBASIC5.09□□□□□ -1.59
Ccdc28aQ8CEI3 Gm2447-201ENSMUST00000191954 544 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Ccdc28aQ8CEI3 Gm18698-201ENSMUST00000192327 668 ntBASIC5.09□□□□□ -1.59
Ccdc28aQ8CEI3 Gm34176-201ENSMUST00000192621 474 ntBASIC5.09□□□□□ -1.59
Ccdc28aQ8CEI3 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Ccdc28aQ8CEI3 Gm45037-201ENSMUST00000207475 673 ntTSL 5 BASIC5.09□□□□□ -1.59
Ccdc28aQ8CEI3 Gm38574-201ENSMUST00000211855 640 ntBASIC5.09□□□□□ -1.59
Ccdc28aQ8CEI3 Gm45777-201ENSMUST00000213009 301 ntBASIC5.09□□□□□ -1.59
Ccdc28aQ8CEI3 RMST_1.1-204ENSMUST00000217871 699 ntTSL 5 BASIC5.09□□□□□ -1.59
Ccdc28aQ8CEI3 AC123064.1-201ENSMUST00000218950 406 ntBASIC5.09□□□□□ -1.59
Ccdc28aQ8CEI3 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC5.09□□□□□ -1.59
Ccdc28aQ8CEI3 Olfr741-201ENSMUST00000071932 936 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Ccdc28aQ8CEI3 Vmn1r33-201ENSMUST00000079678 1036 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Ccdc28aQ8CEI3 Gm24166-201ENSMUST00000082724 135 ntBASIC5.09□□□□□ -1.59
Ccdc28aQ8CEI3 Gm6177-201ENSMUST00000085589 465 ntBASIC5.09□□□□□ -1.59
Ccdc28aQ8CEI3 Olfr1135-201ENSMUST00000099853 933 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Ccdc28aQ8CEI3 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
Ccdc28aQ8CEI3 Olfr703-202ENSMUST00000216254 1920 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
Ccdc28aQ8CEI3 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
Ccdc28aQ8CEI3 Gm2123-201ENSMUST00000221476 2836 ntBASIC5.08□□□□□ -1.6
Ccdc28aQ8CEI3 Gm15128-202ENSMUST00000178833 1350 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Ccdc28aQ8CEI3 Igkv10-94-201ENSMUST00000103330 347 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Ccdc28aQ8CEI3 Gm14836-201ENSMUST00000118567 471 ntBASIC5.08□□□□□ -1.6
Ccdc28aQ8CEI3 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC5.08□□□□□ -1.6
Ccdc28aQ8CEI3 Gm14871-201ENSMUST00000119056 194 ntBASIC5.08□□□□□ -1.6
Ccdc28aQ8CEI3 Gm12768-201ENSMUST00000120055 759 ntBASIC5.08□□□□□ -1.6
Ccdc28aQ8CEI3 Gm11805-201ENSMUST00000121238 600 ntBASIC5.08□□□□□ -1.6
Ccdc28aQ8CEI3 Gm12909-201ENSMUST00000134190 620 ntTSL 2 BASIC5.08□□□□□ -1.6
Ccdc28aQ8CEI3 Gm12753-201ENSMUST00000152086 653 ntTSL 3 BASIC5.08□□□□□ -1.6
Ccdc28aQ8CEI3 Gm23030-201ENSMUST00000158004 273 ntBASIC5.08□□□□□ -1.6
Ccdc28aQ8CEI3 Gm17131-201ENSMUST00000164420 3846 ntBASIC5.08□□□□□ -1.6
Ccdc28aQ8CEI3 Gm27409-201ENSMUST00000184727 80 ntBASIC5.08□□□□□ -1.6
Ccdc28aQ8CEI3 Mir6400-201ENSMUST00000184870 92 ntBASIC5.08□□□□□ -1.6
Ccdc28aQ8CEI3 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Ccdc28aQ8CEI3 Gm8241-201ENSMUST00000189286 816 ntBASIC5.08□□□□□ -1.6
Ccdc28aQ8CEI3 Mrgprc3-ps-201ENSMUST00000189876 955 ntBASIC5.08□□□□□ -1.6
Ccdc28aQ8CEI3 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Ccdc28aQ8CEI3 Gm5842-201ENSMUST00000195073 622 ntBASIC5.08□□□□□ -1.6
Ccdc28aQ8CEI3 Ighv1-44-201ENSMUST00000195597 352 ntBASIC5.08□□□□□ -1.6
Ccdc28aQ8CEI3 Gm43928-201ENSMUST00000203737 409 ntBASIC5.08□□□□□ -1.6
Ccdc28aQ8CEI3 Klk1b23-ps-201ENSMUST00000206347 345 ntBASIC5.08□□□□□ -1.6
Ccdc28aQ8CEI3 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC5.08□□□□□ -1.6
Ccdc28aQ8CEI3 Gm19189-201ENSMUST00000221689 754 ntBASIC5.08□□□□□ -1.6
Ccdc28aQ8CEI3 AC154527.3-201ENSMUST00000225519 989 ntBASIC5.08□□□□□ -1.6
Ccdc28aQ8CEI3 Macc1-201ENSMUST00000048880 3818 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Ccdc28aQ8CEI3 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Ccdc28aQ8CEI3 Olfr39-201ENSMUST00000071725 1098 ntTSL 2 BASIC5.08□□□□□ -1.6
Ccdc28aQ8CEI3 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC5.08□□□□□ -1.6
Ccdc28aQ8CEI3 Gm43085-201ENSMUST00000202859 3132 ntBASIC5.08□□□□□ -1.6
Ccdc28aQ8CEI3 Gm19744-204ENSMUST00000188936 4533 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Ccdc28aQ8CEI3 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Ccdc28aQ8CEI3 Phyhipl-206ENSMUST00000162251 1540 ntTSL 3 BASIC5.07□□□□□ -1.6
Ccdc28aQ8CEI3 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Ccdc28aQ8CEI3 Ankrd28-204ENSMUST00000227089 3522 ntBASIC5.07□□□□□ -1.6
Ccdc28aQ8CEI3 Gm43654-201ENSMUST00000200664 3417 ntBASIC5.07□□□□□ -1.6
Ccdc28aQ8CEI3 Gm37749-201ENSMUST00000193917 1899 ntBASIC5.07□□□□□ -1.6
Ccdc28aQ8CEI3 Gm8822-201ENSMUST00000118948 2347 ntBASIC5.07□□□□□ -1.6
Ccdc28aQ8CEI3 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ccdc28aQ8CEI3 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ccdc28aQ8CEI3 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Ccdc28aQ8CEI3 Olfr947-ps1-201ENSMUST00000214075 2165 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
Ccdc28aQ8CEI3 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Ccdc28aQ8CEI3 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Ccdc28aQ8CEI3 Ighv1-39-201ENSMUST00000103515 351 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Ccdc28aQ8CEI3 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC5.07□□□□□ -1.6
Ccdc28aQ8CEI3 Gm15493-201ENSMUST00000119461 528 ntBASIC5.07□□□□□ -1.6
Ccdc28aQ8CEI3 Olfr1298-201ENSMUST00000119566 939 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Ccdc28aQ8CEI3 Gm15166-201ENSMUST00000120790 385 ntBASIC5.07□□□□□ -1.6
Ccdc28aQ8CEI3 Gm24236-201ENSMUST00000157794 134 ntBASIC5.07□□□□□ -1.6
Ccdc28aQ8CEI3 Gm25363-201ENSMUST00000158850 245 ntBASIC5.07□□□□□ -1.6
Ccdc28aQ8CEI3 Gm27225-201ENSMUST00000183833 557 ntBASIC5.07□□□□□ -1.6
Ccdc28aQ8CEI3 Mir7211-201ENSMUST00000184071 63 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 88.2 ms