Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 n-R5s13-201ENSMUST00000093707 119 ntBASIC7.47□□□□□ -1.21
Usp40Q8BWR4 Fmn1-202ENSMUST00000099576 11817 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
Usp40Q8BWR4 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Usp40Q8BWR4 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC7.47□□□□□ -1.21
Usp40Q8BWR4 Sphkap-205ENSMUST00000160953 8154 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Usp40Q8BWR4 AC103672.2-201ENSMUST00000228146 1687 ntBASIC7.47□□□□□ -1.21
Usp40Q8BWR4 AC121870.1-201ENSMUST00000216279 4879 ntBASIC7.47□□□□□ -1.21
Usp40Q8BWR4 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
Usp40Q8BWR4 Gm43314-201ENSMUST00000196744 2231 ntBASIC7.47□□□□□ -1.21
Usp40Q8BWR4 Gm45179-201ENSMUST00000208452 4337 ntBASIC7.46□□□□□ -1.21
Usp40Q8BWR4 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC7.46□□□□□ -1.21
Usp40Q8BWR4 Kat6b-ps1-201ENSMUST00000187624 3433 ntBASIC7.46□□□□□ -1.21
Usp40Q8BWR4 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC7.46□□□□□ -1.21
Usp40Q8BWR4 Gm37051-201ENSMUST00000194535 2943 ntBASIC7.46□□□□□ -1.21
Usp40Q8BWR4 Slc22a8-202ENSMUST00000170817 3398 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
Usp40Q8BWR4 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Usp40Q8BWR4 Gm22266-201ENSMUST00000104011 138 ntBASIC7.46□□□□□ -1.22
Usp40Q8BWR4 Gm25773-201ENSMUST00000116718 127 ntBASIC7.46□□□□□ -1.22
Usp40Q8BWR4 Gm15766-201ENSMUST00000118025 813 ntBASIC7.46□□□□□ -1.22
Usp40Q8BWR4 Gm12401-201ENSMUST00000118435 228 ntBASIC7.46□□□□□ -1.22
Usp40Q8BWR4 Gm12465-201ENSMUST00000118591 300 ntBASIC7.46□□□□□ -1.22
Usp40Q8BWR4 Gm12577-201ENSMUST00000119701 574 ntBASIC7.46□□□□□ -1.22
Usp40Q8BWR4 Gm11407-201ENSMUST00000120362 1058 ntBASIC7.46□□□□□ -1.22
Usp40Q8BWR4 Gm11891-201ENSMUST00000121241 619 ntBASIC7.46□□□□□ -1.22
Usp40Q8BWR4 Gm25389-201ENSMUST00000157340 286 ntBASIC7.46□□□□□ -1.22
Usp40Q8BWR4 Gm25383-201ENSMUST00000157810 144 ntBASIC7.46□□□□□ -1.22
Usp40Q8BWR4 Gm24211-201ENSMUST00000158264 107 ntBASIC7.46□□□□□ -1.22
Usp40Q8BWR4 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.22
Usp40Q8BWR4 Olfr325-201ENSMUST00000169428 1065 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Usp40Q8BWR4 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC7.46□□□□□ -1.22
Usp40Q8BWR4 Ppp1r2-ps9-201ENSMUST00000173100 549 ntBASIC7.46□□□□□ -1.22
Usp40Q8BWR4 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC7.46□□□□□ -1.22
Usp40Q8BWR4 Gm3259-205ENSMUST00000185432 1077 ntTSL 3 BASIC7.46□□□□□ -1.22
Usp40Q8BWR4 Gm29513-201ENSMUST00000185741 202 ntBASIC7.46□□□□□ -1.22
Usp40Q8BWR4 Gm28353-201ENSMUST00000186482 570 ntBASIC7.46□□□□□ -1.22
Usp40Q8BWR4 Gm28533-201ENSMUST00000186741 570 ntBASIC7.46□□□□□ -1.22
Usp40Q8BWR4 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC7.46□□□□□ -1.22
Usp40Q8BWR4 Gm19029-201ENSMUST00000189923 564 ntBASIC7.46□□□□□ -1.22
Usp40Q8BWR4 Gm29137-201ENSMUST00000190301 520 ntTSL 5 BASIC7.46□□□□□ -1.22
Usp40Q8BWR4 Gm17935-201ENSMUST00000196649 772 ntBASIC7.46□□□□□ -1.22
Usp40Q8BWR4 Gm43344-201ENSMUST00000198723 1229 ntBASIC7.46□□□□□ -1.22
Usp40Q8BWR4 Gm9038-201ENSMUST00000203400 604 ntBASIC7.46□□□□□ -1.22
Usp40Q8BWR4 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Usp40Q8BWR4 Gm45870-201ENSMUST00000211269 601 ntBASIC7.46□□□□□ -1.22
Usp40Q8BWR4 Olfr574-202ENSMUST00000211329 1039 ntAPPRIS ALT2 BASIC7.46□□□□□ -1.22
Usp40Q8BWR4 Gm32283-201ENSMUST00000218861 549 ntTSL 5 BASIC7.46□□□□□ -1.22
Usp40Q8BWR4 AC165953.1-201ENSMUST00000226386 357 ntBASIC7.46□□□□□ -1.22
Usp40Q8BWR4 AC102603.1-201ENSMUST00000227481 584 ntBASIC7.46□□□□□ -1.22
Usp40Q8BWR4 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Usp40Q8BWR4 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC7.46□□□□□ -1.22
Usp40Q8BWR4 mt-Td-201ENSMUST00000082404 70 ntBASIC7.46□□□□□ -1.22
Usp40Q8BWR4 Gm22456-201ENSMUST00000082578 125 ntBASIC7.46□□□□□ -1.22
Usp40Q8BWR4 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC7.46□□□□□ -1.22
Usp40Q8BWR4 AC155634.1-201ENSMUST00000221687 2706 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Usp40Q8BWR4 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
Usp40Q8BWR4 Gm37435-201ENSMUST00000192078 3947 ntBASIC7.46□□□□□ -1.22
Usp40Q8BWR4 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Usp40Q8BWR4 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Usp40Q8BWR4 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Usp40Q8BWR4 Gm28240-201ENSMUST00000187560 2053 ntBASIC7.45□□□□□ -1.22
Usp40Q8BWR4 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC7.45□□□□□ -1.22
Usp40Q8BWR4 9630002D21Rik-202ENSMUST00000222033 2345 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Usp40Q8BWR4 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC7.45□□□□□ -1.22
Usp40Q8BWR4 Dnah5-201ENSMUST00000067048 15637 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Usp40Q8BWR4 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Usp40Q8BWR4 Gm15185-201ENSMUST00000117397 746 ntBASIC7.45□□□□□ -1.22
Usp40Q8BWR4 Gm7206-201ENSMUST00000117730 508 ntBASIC7.45□□□□□ -1.22
Usp40Q8BWR4 Gm11833-201ENSMUST00000118393 853 ntBASIC7.45□□□□□ -1.22
Usp40Q8BWR4 Gm2199-201ENSMUST00000119065 874 ntBASIC7.45□□□□□ -1.22
Usp40Q8BWR4 Defa-ps13-201ENSMUST00000120695 204 ntBASIC7.45□□□□□ -1.22
Usp40Q8BWR4 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC7.45□□□□□ -1.22
Usp40Q8BWR4 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC7.45□□□□□ -1.22
Usp40Q8BWR4 Gm25271-201ENSMUST00000157273 290 ntBASIC7.45□□□□□ -1.22
Usp40Q8BWR4 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Usp40Q8BWR4 Gm28976-201ENSMUST00000188070 144 ntBASIC7.45□□□□□ -1.22
Usp40Q8BWR4 Gm34176-201ENSMUST00000192621 474 ntBASIC7.45□□□□□ -1.22
Usp40Q8BWR4 Gm43631-201ENSMUST00000202011 369 ntBASIC7.45□□□□□ -1.22
Usp40Q8BWR4 Gm6828-201ENSMUST00000207902 1186 ntBASIC7.45□□□□□ -1.22
Usp40Q8BWR4 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Usp40Q8BWR4 AC147615.1-201ENSMUST00000218914 441 ntBASIC7.45□□□□□ -1.22
Usp40Q8BWR4 Gm32300-201ENSMUST00000221735 515 ntBASIC7.45□□□□□ -1.22
Usp40Q8BWR4 AC154239.2-201ENSMUST00000227859 233 ntBASIC7.45□□□□□ -1.22
Usp40Q8BWR4 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Usp40Q8BWR4 Rapgef6-201ENSMUST00000094536 3372 ntTSL 5 BASIC7.45□□□□□ -1.22
Usp40Q8BWR4 AC122357.2-201ENSMUST00000220732 1525 ntBASIC7.45□□□□□ -1.22
Usp40Q8BWR4 Agps-203ENSMUST00000175646 1839 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
Usp40Q8BWR4 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Usp40Q8BWR4 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Usp40Q8BWR4 Mug2-201ENSMUST00000081777 4579 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Usp40Q8BWR4 Brwd3-205ENSMUST00000150434 11619 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Usp40Q8BWR4 Olfr1065-202ENSMUST00000216162 2148 ntAPPRIS P1 TSL 3 BASIC7.45□□□□□ -1.22
Usp40Q8BWR4 Xpo7-203ENSMUST00000226448 3663 ntBASIC7.45□□□□□ -1.22
Usp40Q8BWR4 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
Usp40Q8BWR4 Gm17175-201ENSMUST00000172117 1403 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Usp40Q8BWR4 Slc17a3-201ENSMUST00000039721 4276 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
Usp40Q8BWR4 Ogt-202ENSMUST00000119299 3840 ntAPPRIS ALT1 TSL 5 BASIC7.44□□□□□ -1.22
Usp40Q8BWR4 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC7.44□□□□□ -1.22
Usp40Q8BWR4 Olfr1049-202ENSMUST00000216185 1471 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Usp40Q8BWR4 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Usp40Q8BWR4 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms