Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm23692-201ENSMUST00000101881 160 ntBASIC6.28□□□□□ -1.4
Ddx55Q6ZPL9 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC6.28□□□□□ -1.4
Ddx55Q6ZPL9 Gm15670-201ENSMUST00000117740 447 ntBASIC6.28□□□□□ -1.4
Ddx55Q6ZPL9 Gm11366-201ENSMUST00000119279 429 ntBASIC6.28□□□□□ -1.4
Ddx55Q6ZPL9 Fyttd1-202ENSMUST00000120345 648 ntTSL 5 BASIC6.28□□□□□ -1.4
Ddx55Q6ZPL9 Gm12026-201ENSMUST00000120961 1024 ntBASIC6.28□□□□□ -1.4
Ddx55Q6ZPL9 Gm12127-201ENSMUST00000123278 706 ntTSL 3 BASIC6.28□□□□□ -1.4
Ddx55Q6ZPL9 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC6.28□□□□□ -1.4
Ddx55Q6ZPL9 Gm16345-201ENSMUST00000146065 158 ntBASIC6.28□□□□□ -1.4
Ddx55Q6ZPL9 Gm21698-201ENSMUST00000178487 666 ntTSL 5 BASIC6.28□□□□□ -1.4
Ddx55Q6ZPL9 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC6.28□□□□□ -1.4
Ddx55Q6ZPL9 Gm28847-201ENSMUST00000186778 700 ntBASIC6.28□□□□□ -1.4
Ddx55Q6ZPL9 Gm18303-201ENSMUST00000190055 1176 ntBASIC6.28□□□□□ -1.4
Ddx55Q6ZPL9 Gm38334-201ENSMUST00000195060 313 ntBASIC6.28□□□□□ -1.4
Ddx55Q6ZPL9 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC6.28□□□□□ -1.4
Ddx55Q6ZPL9 Gm8861-201ENSMUST00000196346 832 ntBASIC6.28□□□□□ -1.4
Ddx55Q6ZPL9 Gm9173-201ENSMUST00000198054 400 ntBASIC6.28□□□□□ -1.4
Ddx55Q6ZPL9 Mir409-201ENSMUST00000198153 79 ntBASIC6.28□□□□□ -1.4
Ddx55Q6ZPL9 Gm8891-201ENSMUST00000198546 832 ntBASIC6.28□□□□□ -1.4
Ddx55Q6ZPL9 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC6.28□□□□□ -1.4
Ddx55Q6ZPL9 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC6.28□□□□□ -1.4
Ddx55Q6ZPL9 Gm6841-201ENSMUST00000220602 598 ntBASIC6.28□□□□□ -1.4
Ddx55Q6ZPL9 AC131745.1-201ENSMUST00000223660 330 ntBASIC6.28□□□□□ -1.4
Ddx55Q6ZPL9 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC6.28□□□□□ -1.4
Ddx55Q6ZPL9 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Ddx55Q6ZPL9 AC102291.1-201ENSMUST00000227164 529 ntBASIC6.28□□□□□ -1.4
Ddx55Q6ZPL9 AC161383.1-201ENSMUST00000227356 527 ntBASIC6.28□□□□□ -1.4
Ddx55Q6ZPL9 Olfr720-201ENSMUST00000035250 1023 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Ddx55Q6ZPL9 Gm6369-201ENSMUST00000069626 412 ntBASIC6.28□□□□□ -1.4
Ddx55Q6ZPL9 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ddx55Q6ZPL9 Vmn1r203-201ENSMUST00000091729 936 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Ddx55Q6ZPL9 Vmn1r27-201ENSMUST00000095862 912 ntAPPRIS P2 BASIC6.28□□□□□ -1.4
Ddx55Q6ZPL9 Gm13057-201ENSMUST00000105776 2093 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Ddx55Q6ZPL9 Gm43523-201ENSMUST00000197397 2878 ntBASIC6.28□□□□□ -1.4
Ddx55Q6ZPL9 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC6.28□□□□□ -1.4
Ddx55Q6ZPL9 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Ddx55Q6ZPL9 Olfr1420-203ENSMUST00000217281 2998 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Ddx55Q6ZPL9 Gm10310-202ENSMUST00000213667 4661 ntAPPRIS P5 TSL 5 BASIC6.28□□□□□ -1.4
Ddx55Q6ZPL9 Acvr1c-202ENSMUST00000100085 4289 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Ddx55Q6ZPL9 Agtr1b-202ENSMUST00000163776 1633 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Ddx55Q6ZPL9 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC6.28□□□□□ -1.4
Ddx55Q6ZPL9 Gm37846-201ENSMUST00000191840 3774 ntBASIC6.28□□□□□ -1.4
Ddx55Q6ZPL9 Olfr736-204ENSMUST00000215227 2485 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.4
Ddx55Q6ZPL9 Vmn2r2-201ENSMUST00000077958 2484 ntAPPRIS P2 TSL 5 BASIC6.27□□□□□ -1.4
Ddx55Q6ZPL9 Olfr726-208ENSMUST00000217422 1302 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Ddx55Q6ZPL9 AC164297.4-201ENSMUST00000224225 1307 ntBASIC6.27□□□□□ -1.41
Ddx55Q6ZPL9 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Ddx55Q6ZPL9 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC6.27□□□□□ -1.41
Ddx55Q6ZPL9 Gm43330-201ENSMUST00000199706 2153 ntBASIC6.27□□□□□ -1.41
Ddx55Q6ZPL9 Gm13058-201ENSMUST00000117097 1435 ntBASIC6.27□□□□□ -1.41
Ddx55Q6ZPL9 Gm28320-201ENSMUST00000187777 2273 ntBASIC6.27□□□□□ -1.41
Ddx55Q6ZPL9 Gm24117-201ENSMUST00000103973 133 ntBASIC6.27□□□□□ -1.41
Ddx55Q6ZPL9 Gm24350-201ENSMUST00000104163 133 ntBASIC6.27□□□□□ -1.41
Ddx55Q6ZPL9 Gm26376-201ENSMUST00000104784 110 ntBASIC6.27□□□□□ -1.41
Ddx55Q6ZPL9 Gm10936-201ENSMUST00000105264 252 ntBASIC6.27□□□□□ -1.41
Ddx55Q6ZPL9 Gm13103-202ENSMUST00000105768 994 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
Ddx55Q6ZPL9 Gm11912-201ENSMUST00000117235 264 ntBASIC6.27□□□□□ -1.41
Ddx55Q6ZPL9 Gm15779-201ENSMUST00000117470 412 ntBASIC6.27□□□□□ -1.41
Ddx55Q6ZPL9 Gm7206-201ENSMUST00000117730 508 ntBASIC6.27□□□□□ -1.41
Ddx55Q6ZPL9 Gm14885-201ENSMUST00000117969 496 ntBASIC6.27□□□□□ -1.41
Ddx55Q6ZPL9 Rpl27-ps2-201ENSMUST00000120378 399 ntBASIC6.27□□□□□ -1.41
Ddx55Q6ZPL9 Olfr990-ps1-201ENSMUST00000120485 904 ntBASIC6.27□□□□□ -1.41
Ddx55Q6ZPL9 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Ddx55Q6ZPL9 Gm6245-201ENSMUST00000164699 768 ntBASIC6.27□□□□□ -1.41
Ddx55Q6ZPL9 Gm17038-201ENSMUST00000166586 494 ntBASIC6.27□□□□□ -1.41
Ddx55Q6ZPL9 Gm24561-201ENSMUST00000175182 95 ntBASIC6.27□□□□□ -1.41
Ddx55Q6ZPL9 Gm24754-201ENSMUST00000177997 107 ntBASIC6.27□□□□□ -1.41
Ddx55Q6ZPL9 S100a11-ps-201ENSMUST00000181735 306 ntBASIC6.27□□□□□ -1.41
Ddx55Q6ZPL9 Gm26944-201ENSMUST00000182265 633 ntTSL 3 BASIC6.27□□□□□ -1.41
Ddx55Q6ZPL9 1700109I08Rik-201ENSMUST00000185680 396 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Ddx55Q6ZPL9 Gm29405-201ENSMUST00000187204 370 ntTSL 5 BASIC6.27□□□□□ -1.41
Ddx55Q6ZPL9 Gm29557-201ENSMUST00000188245 370 ntTSL 5 BASIC6.27□□□□□ -1.41
Ddx55Q6ZPL9 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Ddx55Q6ZPL9 Gm28174-201ENSMUST00000191003 370 ntTSL 5 BASIC6.27□□□□□ -1.41
Ddx55Q6ZPL9 Gm34882-201ENSMUST00000193245 974 ntTSL 5 BASIC6.27□□□□□ -1.41
Ddx55Q6ZPL9 Gm43524-201ENSMUST00000197278 298 ntBASIC6.27□□□□□ -1.41
Ddx55Q6ZPL9 Gm43408-201ENSMUST00000198263 440 ntBASIC6.27□□□□□ -1.41
Ddx55Q6ZPL9 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Ddx55Q6ZPL9 AC159379.1-201ENSMUST00000218192 620 ntTSL 5 BASIC6.27□□□□□ -1.41
Ddx55Q6ZPL9 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC6.27□□□□□ -1.41
Ddx55Q6ZPL9 AC123705.4-202ENSMUST00000221602 697 ntTSL 2 BASIC6.27□□□□□ -1.41
Ddx55Q6ZPL9 AC164424.1-201ENSMUST00000221690 170 ntBASIC6.27□□□□□ -1.41
Ddx55Q6ZPL9 AC134860.4-201ENSMUST00000223592 978 ntBASIC6.27□□□□□ -1.41
Ddx55Q6ZPL9 AC154576.2-203ENSMUST00000224736 253 ntBASIC6.27□□□□□ -1.41
Ddx55Q6ZPL9 AC117656.3-204ENSMUST00000225656 859 ntBASIC6.27□□□□□ -1.41
Ddx55Q6ZPL9 AC154738.1-201ENSMUST00000227054 368 ntBASIC6.27□□□□□ -1.41
Ddx55Q6ZPL9 n-R5s62-201ENSMUST00000082780 96 ntBASIC6.27□□□□□ -1.41
Ddx55Q6ZPL9 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC6.27□□□□□ -1.41
Ddx55Q6ZPL9 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Ddx55Q6ZPL9 Olfr998-202ENSMUST00000215083 1399 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Ddx55Q6ZPL9 Eif2s2-205ENSMUST00000166171 2312 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Ddx55Q6ZPL9 Gm43788-201ENSMUST00000201539 2417 ntBASIC6.27□□□□□ -1.41
Ddx55Q6ZPL9 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Ddx55Q6ZPL9 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Ddx55Q6ZPL9 Gm14367-201ENSMUST00000119214 1497 ntBASIC6.27□□□□□ -1.41
Ddx55Q6ZPL9 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Ddx55Q6ZPL9 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Ddx55Q6ZPL9 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Ddx55Q6ZPL9 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Ddx55Q6ZPL9 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms