Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Olfr1046-201ENSMUST00000099902 951 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Trim41Q5NCC3 Gm37332-201ENSMUST00000195853 2844 ntBASIC11.41□□□□□ -0.58
Trim41Q5NCC3 Sox6-205ENSMUST00000169129 5122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim41Q5NCC3 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim41Q5NCC3 Cyp2c29-202ENSMUST00000176624 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim41Q5NCC3 Gm44620-201ENSMUST00000209183 2887 ntBASIC11.41□□□□□ -0.58
Trim41Q5NCC3 Tgtp1-201ENSMUST00000068063 2823 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim41Q5NCC3 AC162910.1-201ENSMUST00000221219 1723 ntBASIC11.4□□□□□ -0.58
Trim41Q5NCC3 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trim41Q5NCC3 Eaf2-202ENSMUST00000075946 1878 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trim41Q5NCC3 Plec-218ENSMUST00000169714 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim41Q5NCC3 Plec-201ENSMUST00000023226 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim41Q5NCC3 Gm10693-201ENSMUST00000144146 2037 ntBASIC11.4□□□□□ -0.58
Trim41Q5NCC3 Gm15930-201ENSMUST00000156603 2037 ntBASIC11.4□□□□□ -0.58
Trim41Q5NCC3 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Trim41Q5NCC3 Gm14529-201ENSMUST00000117894 406 ntBASIC11.4□□□□□ -0.58
Trim41Q5NCC3 Gm9059-201ENSMUST00000118319 183 ntBASIC11.4□□□□□ -0.58
Trim41Q5NCC3 Gm14520-201ENSMUST00000119258 387 ntBASIC11.4□□□□□ -0.58
Trim41Q5NCC3 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trim41Q5NCC3 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC11.4□□□□□ -0.58
Trim41Q5NCC3 Gm11528-201ENSMUST00000156822 914 ntTSL 2 BASIC11.4□□□□□ -0.58
Trim41Q5NCC3 Gm23071-201ENSMUST00000158242 115 ntBASIC11.4□□□□□ -0.58
Trim41Q5NCC3 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trim41Q5NCC3 Gm9632-201ENSMUST00000195934 643 ntBASIC11.4□□□□□ -0.58
Trim41Q5NCC3 Gm18340-201ENSMUST00000196342 609 ntBASIC11.4□□□□□ -0.58
Trim41Q5NCC3 Gm5853-201ENSMUST00000197183 632 ntBASIC11.4□□□□□ -0.58
Trim41Q5NCC3 Trav3n-2-201ENSMUST00000197693 334 ntBASIC11.4□□□□□ -0.58
Trim41Q5NCC3 Trav3d-2-201ENSMUST00000199874 334 ntBASIC11.4□□□□□ -0.58
Trim41Q5NCC3 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trim41Q5NCC3 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC11.4□□□□□ -0.58
Trim41Q5NCC3 Gm19237-201ENSMUST00000205036 1132 ntBASIC11.4□□□□□ -0.58
Trim41Q5NCC3 Gm18258-201ENSMUST00000210413 542 ntBASIC11.4□□□□□ -0.58
Trim41Q5NCC3 Noxred1-201ENSMUST00000021423 1101 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Trim41Q5NCC3 Gm31931-201ENSMUST00000219666 222 ntBASIC11.4□□□□□ -0.58
Trim41Q5NCC3 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trim41Q5NCC3 AC154595.2-201ENSMUST00000225067 310 ntBASIC11.4□□□□□ -0.58
Trim41Q5NCC3 Gm7887-201ENSMUST00000056948 537 ntBASIC11.4□□□□□ -0.58
Trim41Q5NCC3 Mir412-201ENSMUST00000083636 80 ntBASIC11.4□□□□□ -0.58
Trim41Q5NCC3 Patj-204ENSMUST00000107029 4342 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trim41Q5NCC3 Epb41l2-219ENSMUST00000220290 4345 ntTSL 5 BASIC11.4□□□□□ -0.58
Trim41Q5NCC3 Bmx-201ENSMUST00000112263 2433 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Trim41Q5NCC3 Il1rapl1-201ENSMUST00000078875 2091 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Trim41Q5NCC3 Cep85-202ENSMUST00000121566 3748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim41Q5NCC3 Ptpn22-201ENSMUST00000029433 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim41Q5NCC3 Tcf12-221ENSMUST00000185117 3986 ntAPPRIS ALT1 TSL 5 BASIC11.4□□□□□ -0.59
Trim41Q5NCC3 AC161884.1-201ENSMUST00000225436 2174 ntBASIC11.4□□□□□ -0.59
Trim41Q5NCC3 Ccdc127-201ENSMUST00000022063 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trim41Q5NCC3 Gm45562-201ENSMUST00000210015 1537 ntBASIC11.4□□□□□ -0.59
Trim41Q5NCC3 Gm37364-201ENSMUST00000192533 3920 ntBASIC11.4□□□□□ -0.59
Trim41Q5NCC3 Ate1-208ENSMUST00000216011 1680 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Trim41Q5NCC3 Kcna2-203ENSMUST00000197470 4370 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trim41Q5NCC3 Slc22a6-201ENSMUST00000010250 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim41Q5NCC3 Gm43876-201ENSMUST00000203831 3229 ntBASIC11.39□□□□□ -0.59
Trim41Q5NCC3 Lpp-201ENSMUST00000038053 15647 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim41Q5NCC3 AC121997.2-201ENSMUST00000228095 2294 ntBASIC11.39□□□□□ -0.59
Trim41Q5NCC3 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim41Q5NCC3 Mrpl48-208ENSMUST00000150042 4285 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim41Q5NCC3 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trim41Q5NCC3 Gm43113-201ENSMUST00000199713 1754 ntBASIC11.39□□□□□ -0.59
Trim41Q5NCC3 Mrgprx2-202ENSMUST00000186394 1930 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trim41Q5NCC3 Eif2ak2-201ENSMUST00000024884 4313 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim41Q5NCC3 Atrx-201ENSMUST00000101305 2903 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trim41Q5NCC3 Gm15025-201ENSMUST00000118434 418 ntBASIC11.39□□□□□ -0.59
Trim41Q5NCC3 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC11.39□□□□□ -0.59
Trim41Q5NCC3 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC11.39□□□□□ -0.59
Trim41Q5NCC3 1700061H18Rik-202ENSMUST00000147221 564 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trim41Q5NCC3 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trim41Q5NCC3 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC11.39□□□□□ -0.59
Trim41Q5NCC3 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC11.39□□□□□ -0.59
Trim41Q5NCC3 Gm43369-201ENSMUST00000196373 1552 ntBASIC11.39□□□□□ -0.59
Trim41Q5NCC3 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC11.39□□□□□ -0.59
Trim41Q5NCC3 Gm17766-201ENSMUST00000209223 442 ntBASIC11.39□□□□□ -0.59
Trim41Q5NCC3 AC140288.1-201ENSMUST00000226329 503 ntBASIC11.39□□□□□ -0.59
Trim41Q5NCC3 Gm12582-201ENSMUST00000030555 697 ntBASIC11.39□□□□□ -0.59
Trim41Q5NCC3 Cd200r3-201ENSMUST00000048479 986 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim41Q5NCC3 Ear14-201ENSMUST00000049559 468 ntBASIC11.39□□□□□ -0.59
Trim41Q5NCC3 Gadl1-201ENSMUST00000069651 3652 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Trim41Q5NCC3 Olfr39-201ENSMUST00000071725 1098 ntTSL 2 BASIC11.39□□□□□ -0.59
Trim41Q5NCC3 Cyp2b23-201ENSMUST00000077356 2189 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trim41Q5NCC3 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim41Q5NCC3 Olfr1499-202ENSMUST00000216659 1834 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trim41Q5NCC3 Olfr845-203ENSMUST00000215572 3446 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
Trim41Q5NCC3 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim41Q5NCC3 Olfr600-202ENSMUST00000215042 3527 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trim41Q5NCC3 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Trim41Q5NCC3 Gm42645-201ENSMUST00000201573 1627 ntBASIC11.38□□□□□ -0.59
Trim41Q5NCC3 AC153512.1-201ENSMUST00000218961 1603 ntTSL 5 BASIC11.38□□□□□ -0.59
Trim41Q5NCC3 Gm18432-201ENSMUST00000195568 1451 ntBASIC11.38□□□□□ -0.59
Trim41Q5NCC3 Gm45528-201ENSMUST00000209854 3145 ntBASIC11.38□□□□□ -0.59
Trim41Q5NCC3 Olfr731-203ENSMUST00000214152 5572 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trim41Q5NCC3 Ugt2b34-201ENSMUST00000031181 3051 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim41Q5NCC3 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trim41Q5NCC3 Gm22073-201ENSMUST00000122668 189 ntBASIC11.38□□□□□ -0.59
Trim41Q5NCC3 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC11.38□□□□□ -0.59
Trim41Q5NCC3 Gm14505-201ENSMUST00000145383 831 ntTSL 3 BASIC11.38□□□□□ -0.59
Trim41Q5NCC3 Gm6264-202ENSMUST00000162896 1217 ntBASIC11.38□□□□□ -0.59
Trim41Q5NCC3 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trim41Q5NCC3 4930509E16Rik-201ENSMUST00000181405 1191 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trim41Q5NCC3 Gm9238-201ENSMUST00000196181 329 ntBASIC11.38□□□□□ -0.59
Trim41Q5NCC3 Gm42886-201ENSMUST00000199214 466 ntBASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms