Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Gtdc1-203ENSMUST00000112810 2564 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Magea6-202ENSMUST00000112562 1212 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Usp39Q3TIX9 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Gm25315-201ENSMUST00000116823 121 ntBASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Gm11905-201ENSMUST00000117653 678 ntBASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Gm13359-201ENSMUST00000119000 695 ntBASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Gm11359-201ENSMUST00000120039 567 ntBASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Olfr118-201ENSMUST00000122036 966 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Gm3160-201ENSMUST00000128343 607 ntBASIC5.58□□□□□ -1.52
Usp39Q3TIX9 9130015L21Rik-201ENSMUST00000140319 606 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Usp39Q3TIX9 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Gm23250-201ENSMUST00000157444 267 ntBASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Gm24065-201ENSMUST00000157487 264 ntBASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Gm24363-201ENSMUST00000158440 311 ntBASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Gm23408-201ENSMUST00000158523 265 ntBASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Vmn1r-ps148-201ENSMUST00000176775 455 ntBASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Gm21399-201ENSMUST00000180210 597 ntBASIC5.58□□□□□ -1.52
Usp39Q3TIX9 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Serpinb10-202ENSMUST00000182198 1265 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Gm28490-202ENSMUST00000190946 930 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Gm37609-201ENSMUST00000191778 678 ntBASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Gm37375-201ENSMUST00000193859 387 ntBASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Serpinb10-203ENSMUST00000194951 1194 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Gm37385-201ENSMUST00000195223 387 ntBASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Gm43215-201ENSMUST00000199108 252 ntBASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Gm43798-201ENSMUST00000202056 394 ntBASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Gm6261-201ENSMUST00000204707 760 ntBASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Gm44993-201ENSMUST00000208435 842 ntTSL 3 BASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Gm38590-201ENSMUST00000209515 970 ntTSL 5 BASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Olfr654-202ENSMUST00000210457 1156 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Olfr878-202ENSMUST00000212878 1064 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Gm45724-201ENSMUST00000213031 420 ntBASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Gm7802-201ENSMUST00000216464 262 ntBASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Gm31904-201ENSMUST00000219446 877 ntTSL 5 BASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Gm18592-201ENSMUST00000221529 276 ntBASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Gm34215-202ENSMUST00000223024 492 ntTSL 5 BASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Gnrh1-202ENSMUST00000223929 428 ntBASIC5.58□□□□□ -1.52
Usp39Q3TIX9 AC122393.1-201ENSMUST00000226570 319 ntBASIC5.58□□□□□ -1.52
Usp39Q3TIX9 CT572983.1-201ENSMUST00000226895 514 ntBASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Magea6-201ENSMUST00000076986 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Usp39Q3TIX9 n-R5s196-201ENSMUST00000083136 117 ntBASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Scgb2b27-201ENSMUST00000085620 512 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Fpr-rs6-201ENSMUST00000095636 1020 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Olfr606-201ENSMUST00000098200 960 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Ifi202b-201ENSMUST00000000266 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Olfr1270-203ENSMUST00000215578 4982 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Olfr357-202ENSMUST00000213218 5367 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Gm33843-201ENSMUST00000219313 1637 ntTSL 5 BASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Acvr1c-202ENSMUST00000100085 4289 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Olfr1087-202ENSMUST00000214141 3861 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Gm43627-201ENSMUST00000197119 2299 ntBASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Spata6-203ENSMUST00000084354 2239 ntTSL 5 BASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Olfr1505-203ENSMUST00000216835 3685 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Usp39Q3TIX9 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Usp39Q3TIX9 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Usp39Q3TIX9 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC5.57□□□□□ -1.52
Usp39Q3TIX9 Cyp3a16-201ENSMUST00000031633 1730 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Usp39Q3TIX9 Ceacam15-201ENSMUST00000108498 1391 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Usp39Q3TIX9 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Usp39Q3TIX9 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Usp39Q3TIX9 CT009480.3-201ENSMUST00000224051 3032 ntBASIC5.57□□□□□ -1.52
Usp39Q3TIX9 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Usp39Q3TIX9 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Usp39Q3TIX9 Gm37407-201ENSMUST00000194793 1316 ntBASIC5.57□□□□□ -1.52
Usp39Q3TIX9 AC159188.2-201ENSMUST00000224103 1301 ntBASIC5.57□□□□□ -1.52
Usp39Q3TIX9 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Usp39Q3TIX9 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Usp39Q3TIX9 Gm16270-201ENSMUST00000160327 3238 ntBASIC5.57□□□□□ -1.52
Usp39Q3TIX9 Trav14n-3-201ENSMUST00000103635 280 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Usp39Q3TIX9 Gm23294-201ENSMUST00000104150 164 ntBASIC5.57□□□□□ -1.52
Usp39Q3TIX9 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
Usp39Q3TIX9 Mier1-203ENSMUST00000106855 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Usp39Q3TIX9 Gm12193-201ENSMUST00000117250 379 ntBASIC5.57□□□□□ -1.52
Usp39Q3TIX9 Gm14624-201ENSMUST00000117746 192 ntBASIC5.57□□□□□ -1.52
Usp39Q3TIX9 Gm14115-201ENSMUST00000119242 482 ntBASIC5.57□□□□□ -1.52
Usp39Q3TIX9 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
Usp39Q3TIX9 Gng2-ps1-201ENSMUST00000120523 217 ntBASIC5.57□□□□□ -1.52
Usp39Q3TIX9 Gm13339-201ENSMUST00000120651 510 ntBASIC5.57□□□□□ -1.52
Usp39Q3TIX9 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC5.57□□□□□ -1.52
Usp39Q3TIX9 Fundc1-203ENSMUST00000142638 597 ntTSL 3 BASIC5.57□□□□□ -1.52
Usp39Q3TIX9 Il2ra-202ENSMUST00000150890 1013 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Usp39Q3TIX9 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Usp39Q3TIX9 Mipepos-201ENSMUST00000155855 610 ntTSL 3 BASIC5.57□□□□□ -1.52
Usp39Q3TIX9 Gm24179-201ENSMUST00000158925 127 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 90.4 ms