Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC5.69□□□□□ -1.5
CiitaP79621 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CiitaP79621 Airn-203ENSMUST00000159791 485 ntTSL 3 BASIC5.69□□□□□ -1.5
CiitaP79621 Gm15838-201ENSMUST00000161575 180 ntBASIC5.69□□□□□ -1.5
CiitaP79621 Ctla2b-202ENSMUST00000171347 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CiitaP79621 Gm37241-201ENSMUST00000191736 523 ntBASIC5.69□□□□□ -1.5
CiitaP79621 Gm37631-201ENSMUST00000192275 364 ntBASIC5.69□□□□□ -1.5
CiitaP79621 Gm34882-201ENSMUST00000193245 974 ntTSL 5 BASIC5.69□□□□□ -1.5
CiitaP79621 Gm18864-201ENSMUST00000194518 1051 ntBASIC5.69□□□□□ -1.5
CiitaP79621 Gm43408-201ENSMUST00000198263 440 ntBASIC5.69□□□□□ -1.5
CiitaP79621 Clec2g-205ENSMUST00000203405 967 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CiitaP79621 Gm18537-201ENSMUST00000205709 989 ntBASIC5.69□□□□□ -1.5
CiitaP79621 4930405G09Rik-201ENSMUST00000207912 1060 ntBASIC5.69□□□□□ -1.5
CiitaP79621 AC152979.3-201ENSMUST00000217720 479 ntBASIC5.69□□□□□ -1.5
CiitaP79621 AC153553.1-201ENSMUST00000218257 684 ntBASIC5.69□□□□□ -1.5
CiitaP79621 AC122508.1-201ENSMUST00000218365 233 ntTSL 5 BASIC5.69□□□□□ -1.5
CiitaP79621 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC5.69□□□□□ -1.5
CiitaP79621 Gm6776-201ENSMUST00000057752 900 ntBASIC5.69□□□□□ -1.5
CiitaP79621 Gm9958-201ENSMUST00000068250 1284 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CiitaP79621 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CiitaP79621 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
CiitaP79621 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
CiitaP79621 Gm7416-201ENSMUST00000117448 1487 ntBASIC5.69□□□□□ -1.5
CiitaP79621 D7Ertd443e-202ENSMUST00000106129 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CiitaP79621 Cyp2j12-201ENSMUST00000097972 1675 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CiitaP79621 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CiitaP79621 Olfr813-202ENSMUST00000204622 2410 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CiitaP79621 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CiitaP79621 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CiitaP79621 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC5.68□□□□□ -1.5
CiitaP79621 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
CiitaP79621 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CiitaP79621 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CiitaP79621 Tcrg-V3-201ENSMUST00000103559 350 ntAPPRIS ALT2 BASIC5.68□□□□□ -1.5
CiitaP79621 Gm24789-201ENSMUST00000104282 131 ntBASIC5.68□□□□□ -1.5
CiitaP79621 Rpl36a-201ENSMUST00000113211 483 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CiitaP79621 Cetn2-202ENSMUST00000114550 1124 ntTSL 3 BASIC5.68□□□□□ -1.5
CiitaP79621 Olfr1083-ps-201ENSMUST00000117704 943 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CiitaP79621 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC5.68□□□□□ -1.5
CiitaP79621 4933416E14Rik-201ENSMUST00000130841 491 ntBASIC5.68□□□□□ -1.5
CiitaP79621 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC5.68□□□□□ -1.5
CiitaP79621 4930547E08Rik-201ENSMUST00000143559 541 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CiitaP79621 B230216N24Rik-204ENSMUST00000161661 719 ntTSL 2 BASIC5.68□□□□□ -1.5
CiitaP79621 1700071M16Rik-201ENSMUST00000164150 537 ntTSL 3 BASIC5.68□□□□□ -1.5
CiitaP79621 Nup205-202ENSMUST00000170234 1120 ntTSL 5 BASIC5.68□□□□□ -1.5
CiitaP79621 1700025F22Rik-203ENSMUST00000181284 562 ntTSL 3 BASIC5.68□□□□□ -1.5
CiitaP79621 Mir7012-201ENSMUST00000183900 64 ntBASIC5.68□□□□□ -1.5
CiitaP79621 Gm27636-201ENSMUST00000184528 122 ntBASIC5.68□□□□□ -1.5
CiitaP79621 Gm37884-201ENSMUST00000191857 818 ntBASIC5.68□□□□□ -1.5
CiitaP79621 Gm37503-201ENSMUST00000192088 319 ntBASIC5.68□□□□□ -1.5
CiitaP79621 Gm2623-201ENSMUST00000199229 286 ntBASIC5.68□□□□□ -1.5
CiitaP79621 Gm7721-201ENSMUST00000200446 546 ntBASIC5.68□□□□□ -1.5
CiitaP79621 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC5.68□□□□□ -1.5
CiitaP79621 Gm31897-201ENSMUST00000205924 340 ntTSL 5 BASIC5.68□□□□□ -1.5
CiitaP79621 AC154441.1-201ENSMUST00000223653 1006 ntBASIC5.68□□□□□ -1.5
CiitaP79621 Cetn2-201ENSMUST00000033713 1026 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CiitaP79621 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
CiitaP79621 BC049715-201ENSMUST00000052702 1120 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CiitaP79621 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CiitaP79621 Olfr792-201ENSMUST00000076575 936 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CiitaP79621 n-R5s13-201ENSMUST00000093707 119 ntBASIC5.68□□□□□ -1.5
CiitaP79621 Olfr1160-201ENSMUST00000099839 960 ntBASIC5.68□□□□□ -1.5
CiitaP79621 Olfr1152-202ENSMUST00000213308 6201 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CiitaP79621 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CiitaP79621 Ankar-202ENSMUST00000211837 4543 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CiitaP79621 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CiitaP79621 Gm17791-201ENSMUST00000185660 1501 ntBASIC5.68□□□□□ -1.5
CiitaP79621 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CiitaP79621 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CiitaP79621 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC5.68□□□□□ -1.5
CiitaP79621 Olfr145-201ENSMUST00000086062 6796 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CiitaP79621 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC5.67□□□□□ -1.5
CiitaP79621 AC115910.1-201ENSMUST00000221188 4275 ntBASIC5.67□□□□□ -1.5
CiitaP79621 Vmn1r89-205ENSMUST00000227276 1417 ntAPPRIS ALT2 BASIC5.67□□□□□ -1.5
CiitaP79621 AC165273.1-201ENSMUST00000222780 2452 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CiitaP79621 Gm5444-201ENSMUST00000065956 2468 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CiitaP79621 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CiitaP79621 Gm25418-201ENSMUST00000104214 129 ntBASIC5.67□□□□□ -1.5
CiitaP79621 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CiitaP79621 Defb42-202ENSMUST00000111203 567 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
CiitaP79621 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
CiitaP79621 Gm13118-201ENSMUST00000120402 549 ntBASIC5.67□□□□□ -1.5
CiitaP79621 Gm14125-202ENSMUST00000120921 756 ntBASIC5.67□□□□□ -1.5
CiitaP79621 Gm14957-201ENSMUST00000121069 817 ntBASIC5.67□□□□□ -1.5
CiitaP79621 Gm14135-201ENSMUST00000135438 591 ntTSL 3 BASIC5.67□□□□□ -1.5
CiitaP79621 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC5.67□□□□□ -1.5
CiitaP79621 Gm23700-201ENSMUST00000158842 102 ntBASIC5.67□□□□□ -1.5
CiitaP79621 Gm6632-201ENSMUST00000168425 954 ntBASIC5.67□□□□□ -1.5
CiitaP79621 Gm27543-201ENSMUST00000183562 177 ntBASIC5.67□□□□□ -1.5
CiitaP79621 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CiitaP79621 Lockd-204ENSMUST00000184991 243 ntTSL 5 BASIC5.67□□□□□ -1.5
CiitaP79621 Gm37381-201ENSMUST00000192427 899 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CiitaP79621 9430037O13Rik-201ENSMUST00000192556 1008 ntBASIC5.67□□□□□ -1.5
CiitaP79621 Klra14-ps-202ENSMUST00000203601 1104 ntTSL 5 BASIC5.67□□□□□ -1.5
CiitaP79621 Gm29781-201ENSMUST00000203862 478 ntBASIC5.67□□□□□ -1.5
CiitaP79621 Gm44604-201ENSMUST00000205475 496 ntBASIC5.67□□□□□ -1.5
CiitaP79621 Olfr1310-201ENSMUST00000207169 1009 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CiitaP79621 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CiitaP79621 Gm6980-201ENSMUST00000214327 1003 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CiitaP79621 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms