Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm12931-201ENSMUST00000117046 324 ntBASIC4.94□□□□□ -1.62
Sox3P53784 Gm11912-201ENSMUST00000117235 264 ntBASIC4.94□□□□□ -1.62
Sox3P53784 Gm12237-201ENSMUST00000120158 470 ntBASIC4.94□□□□□ -1.62
Sox3P53784 Gm24382-201ENSMUST00000122698 107 ntBASIC4.94□□□□□ -1.62
Sox3P53784 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Sox3P53784 Gm26098-201ENSMUST00000157247 288 ntBASIC4.94□□□□□ -1.62
Sox3P53784 Gm22214-201ENSMUST00000157563 172 ntBASIC4.94□□□□□ -1.62
Sox3P53784 Gm25665-201ENSMUST00000157695 110 ntBASIC4.94□□□□□ -1.62
Sox3P53784 Gm25861-201ENSMUST00000158251 109 ntBASIC4.94□□□□□ -1.62
Sox3P53784 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC4.94□□□□□ -1.62
Sox3P53784 Gm27202-201ENSMUST00000183838 512 ntTSL 5 BASIC4.94□□□□□ -1.62
Sox3P53784 1700029B22Rik-202ENSMUST00000186532 694 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Sox3P53784 Tsg101-ps-201ENSMUST00000201023 1170 ntBASIC4.94□□□□□ -1.62
Sox3P53784 Gm36864-201ENSMUST00000205530 684 ntAPPRIS ALT2 TSL 3 BASIC4.94□□□□□ -1.62
Sox3P53784 Olfr1486-ps1-201ENSMUST00000208835 220 ntBASIC4.94□□□□□ -1.62
Sox3P53784 Gm38843-201ENSMUST00000209189 323 ntTSL 5 BASIC4.94□□□□□ -1.62
Sox3P53784 Olfr915-201ENSMUST00000215191 933 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Sox3P53784 Gm11360-201ENSMUST00000221898 262 ntBASIC4.94□□□□□ -1.62
Sox3P53784 Selenok-ps8-201ENSMUST00000221926 280 ntBASIC4.94□□□□□ -1.62
Sox3P53784 Gm17915-201ENSMUST00000222077 548 ntBASIC4.94□□□□□ -1.62
Sox3P53784 AC146601.1-201ENSMUST00000227910 905 ntBASIC4.94□□□□□ -1.62
Sox3P53784 Olfr510-201ENSMUST00000076289 945 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Sox3P53784 Gm6503-201ENSMUST00000210829 2225 ntBASIC4.94□□□□□ -1.62
Sox3P53784 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Sox3P53784 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Sox3P53784 Gm44675-201ENSMUST00000208188 2927 ntBASIC4.94□□□□□ -1.62
Sox3P53784 Gm37738-201ENSMUST00000192396 4716 ntBASIC4.94□□□□□ -1.62
Sox3P53784 Olfr1115-204ENSMUST00000217196 2109 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
Sox3P53784 CT573016.1-201ENSMUST00000224814 2103 ntAPPRIS P5 BASIC4.94□□□□□ -1.62
Sox3P53784 Clec2g-203ENSMUST00000142388 2404 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Sox3P53784 Vmn2r42-204ENSMUST00000142934 3694 ntTSL 5 BASIC4.94□□□□□ -1.62
Sox3P53784 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC4.94□□□□□ -1.62
Sox3P53784 Olfr1166-201ENSMUST00000099833 1628 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Sox3P53784 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
Sox3P53784 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Sox3P53784 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Sox3P53784 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC4.93□□□□□ -1.62
Sox3P53784 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Sox3P53784 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Sox3P53784 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Sox3P53784 Ceacam13-202ENSMUST00000108488 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Sox3P53784 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Sox3P53784 Olfr1083-ps-201ENSMUST00000117704 943 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Sox3P53784 Gm12884-201ENSMUST00000120371 325 ntBASIC4.93□□□□□ -1.62
Sox3P53784 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Sox3P53784 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Sox3P53784 Scarna13-201ENSMUST00000158164 275 ntBASIC4.93□□□□□ -1.62
Sox3P53784 Gm7316-201ENSMUST00000165395 445 ntBASIC4.93□□□□□ -1.62
Sox3P53784 Gm17711-201ENSMUST00000172028 237 ntBASIC4.93□□□□□ -1.62
Sox3P53784 Vmn2r-ps66-201ENSMUST00000173203 1256 ntBASIC4.93□□□□□ -1.62
Sox3P53784 Gm28652-201ENSMUST00000187008 599 ntTSL 5 BASIC4.93□□□□□ -1.62
Sox3P53784 Gm37480-201ENSMUST00000194795 550 ntTSL 5 BASIC4.93□□□□□ -1.62
Sox3P53784 Gm20056-201ENSMUST00000194813 519 ntBASIC4.93□□□□□ -1.62
Sox3P53784 Gm8458-201ENSMUST00000196658 819 ntBASIC4.93□□□□□ -1.62
Sox3P53784 Gm42428-201ENSMUST00000198677 302 ntBASIC4.93□□□□□ -1.62
Sox3P53784 Gm9038-201ENSMUST00000203400 604 ntBASIC4.93□□□□□ -1.62
Sox3P53784 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC4.93□□□□□ -1.62
Sox3P53784 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC4.93□□□□□ -1.62
Sox3P53784 Gm7128-201ENSMUST00000211639 533 ntBASIC4.93□□□□□ -1.62
Sox3P53784 AC153954.2-201ENSMUST00000213811 287 ntBASIC4.93□□□□□ -1.62
Sox3P53784 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC4.93□□□□□ -1.62
Sox3P53784 AC154627.3-201ENSMUST00000228441 334 ntBASIC4.93□□□□□ -1.62
Sox3P53784 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Sox3P53784 Gm22220-201ENSMUST00000082671 149 ntBASIC4.93□□□□□ -1.62
Sox3P53784 Gm37456-201ENSMUST00000193176 5837 ntBASIC4.93□□□□□ -1.62
Sox3P53784 Zfp975-201ENSMUST00000107992 3148 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Sox3P53784 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Sox3P53784 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC4.93□□□□□ -1.62
Sox3P53784 Vmn1r6-207ENSMUST00000228285 7950 ntAPPRIS P2 BASIC4.93□□□□□ -1.62
Sox3P53784 Dcun1d1-203ENSMUST00000178098 4434 ntTSL 5 BASIC4.93□□□□□ -1.62
Sox3P53784 Epha7-203ENSMUST00000108191 6615 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Sox3P53784 Clca3a1-202ENSMUST00000059091 3524 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Sox3P53784 Gm16185-201ENSMUST00000125071 3207 ntTSL 5 BASIC4.93□□□□□ -1.62
Sox3P53784 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Sox3P53784 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Sox3P53784 Gm7298-201ENSMUST00000204124 4657 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Sox3P53784 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Sox3P53784 Gm10558-201ENSMUST00000147494 1661 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Sox3P53784 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Sox3P53784 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC4.92□□□□□ -1.62
Sox3P53784 AC163032.1-201ENSMUST00000220671 2970 ntBASIC4.92□□□□□ -1.62
Sox3P53784 Olfr890-202ENSMUST00000213458 5475 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Sox3P53784 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Sox3P53784 Abca13-201ENSMUST00000042740 16011 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Sox3P53784 Olfr684-203ENSMUST00000215744 3084 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Sox3P53784 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC4.92□□□□□ -1.62
Sox3P53784 Olfr703-202ENSMUST00000216254 1920 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Sox3P53784 Olfr457-203ENSMUST00000204324 4275 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
Sox3P53784 Galnt1-208ENSMUST00000178605 3796 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Sox3P53784 Gm12073-201ENSMUST00000117382 524 ntBASIC4.92□□□□□ -1.62
Sox3P53784 Gm14620-201ENSMUST00000120656 383 ntBASIC4.92□□□□□ -1.62
Sox3P53784 Gm8988-201ENSMUST00000155015 1240 ntBASIC4.92□□□□□ -1.62
Sox3P53784 Gm13617-201ENSMUST00000155350 675 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Sox3P53784 Gm24188-201ENSMUST00000157980 108 ntBASIC4.92□□□□□ -1.62
Sox3P53784 Gm3531-201ENSMUST00000162698 489 ntBASIC4.92□□□□□ -1.62
Sox3P53784 Gm8256-201ENSMUST00000169178 453 ntBASIC4.92□□□□□ -1.62
Sox3P53784 Gm22411-201ENSMUST00000175462 126 ntBASIC4.92□□□□□ -1.62
Sox3P53784 Gm22002-201ENSMUST00000175622 125 ntBASIC4.92□□□□□ -1.62
Sox3P53784 Gm22254-201ENSMUST00000179186 110 ntBASIC4.92□□□□□ -1.62
Sox3P53784 Gm27387-201ENSMUST00000184583 116 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms