Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm17043-201ENSMUST00000164621 1283 ntBASIC5.94□□□□□ -1.46
Shmt1P50431 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Shmt1P50431 Gm23872-201ENSMUST00000175432 77 ntBASIC5.94□□□□□ -1.46
Shmt1P50431 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC5.94□□□□□ -1.46
Shmt1P50431 Rhoay-ps2-201ENSMUST00000186362 581 ntBASIC5.94□□□□□ -1.46
Shmt1P50431 Gm2325-201ENSMUST00000186637 581 ntBASIC5.94□□□□□ -1.46
Shmt1P50431 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Shmt1P50431 Gm6137-201ENSMUST00000187552 578 ntBASIC5.94□□□□□ -1.46
Shmt1P50431 Gm28639-201ENSMUST00000191519 481 ntBASIC5.94□□□□□ -1.46
Shmt1P50431 Gm44138-201ENSMUST00000204939 271 ntBASIC5.94□□□□□ -1.46
Shmt1P50431 Gm30928-201ENSMUST00000205858 459 ntTSL 3 BASIC5.94□□□□□ -1.46
Shmt1P50431 Gm45343-201ENSMUST00000210452 828 ntBASIC5.94□□□□□ -1.46
Shmt1P50431 Olfr892-ps1-201ENSMUST00000211998 932 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Shmt1P50431 Gm45820-201ENSMUST00000212068 362 ntTSL 3 BASIC5.94□□□□□ -1.46
Shmt1P50431 Gm19170-201ENSMUST00000212440 1084 ntBASIC5.94□□□□□ -1.46
Shmt1P50431 AL935138.1-201ENSMUST00000215309 196 ntBASIC5.94□□□□□ -1.46
Shmt1P50431 Gm19709-201ENSMUST00000215403 482 ntBASIC5.94□□□□□ -1.46
Shmt1P50431 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC5.94□□□□□ -1.46
Shmt1P50431 AC164164.2-201ENSMUST00000221809 785 ntBASIC5.94□□□□□ -1.46
Shmt1P50431 n-R5s88-201ENSMUST00000083173 118 ntBASIC5.94□□□□□ -1.46
Shmt1P50431 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Shmt1P50431 Gm42436-201ENSMUST00000198804 3656 ntBASIC5.94□□□□□ -1.46
Shmt1P50431 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Shmt1P50431 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Shmt1P50431 Phospho2-206ENSMUST00000180290 3267 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Shmt1P50431 Hc-201ENSMUST00000028233 5445 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Shmt1P50431 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
Shmt1P50431 Gm9408-201ENSMUST00000197375 1505 ntBASIC5.94□□□□□ -1.46
Shmt1P50431 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Shmt1P50431 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC5.94□□□□□ -1.46
Shmt1P50431 Gm38451-201ENSMUST00000208329 2646 ntBASIC5.94□□□□□ -1.46
Shmt1P50431 AC137871.4-201ENSMUST00000226323 3901 ntBASIC5.93□□□□□ -1.46
Shmt1P50431 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Shmt1P50431 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Shmt1P50431 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Shmt1P50431 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Shmt1P50431 Gm18757-201ENSMUST00000207938 3141 ntBASIC5.93□□□□□ -1.46
Shmt1P50431 Olfr1054-202ENSMUST00000213205 1410 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Shmt1P50431 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Shmt1P50431 Gm15583-201ENSMUST00000116191 3510 ntBASIC5.93□□□□□ -1.46
Shmt1P50431 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
Shmt1P50431 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Shmt1P50431 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Shmt1P50431 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Shmt1P50431 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Shmt1P50431 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
Shmt1P50431 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Shmt1P50431 Gm14879-201ENSMUST00000117308 507 ntBASIC5.93□□□□□ -1.46
Shmt1P50431 Gm11270-201ENSMUST00000117685 471 ntBASIC5.93□□□□□ -1.46
Shmt1P50431 Olfr1296-ps1-201ENSMUST00000117697 939 ntBASIC5.93□□□□□ -1.46
Shmt1P50431 Olfr1083-ps-201ENSMUST00000117704 943 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Shmt1P50431 Mup-ps19-201ENSMUST00000120390 519 ntBASIC5.93□□□□□ -1.46
Shmt1P50431 Gm13537-201ENSMUST00000120467 267 ntBASIC5.93□□□□□ -1.46
Shmt1P50431 Gm23211-201ENSMUST00000122717 308 ntBASIC5.93□□□□□ -1.46
Shmt1P50431 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC5.93□□□□□ -1.46
Shmt1P50431 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC5.93□□□□□ -1.46
Shmt1P50431 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Shmt1P50431 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC5.93□□□□□ -1.46
Shmt1P50431 Gm15534-201ENSMUST00000137642 562 ntBASIC5.93□□□□□ -1.46
Shmt1P50431 Crem-219ENSMUST00000140332 1015 ntTSL 5 BASIC5.93□□□□□ -1.46
Shmt1P50431 Gm22596-201ENSMUST00000157601 316 ntBASIC5.93□□□□□ -1.46
Shmt1P50431 Gm22916-201ENSMUST00000157616 119 ntBASIC5.93□□□□□ -1.46
Shmt1P50431 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC5.93□□□□□ -1.46
Shmt1P50431 Gm26970-201ENSMUST00000182990 964 ntBASIC5.93□□□□□ -1.46
Shmt1P50431 Gm27225-201ENSMUST00000183833 557 ntBASIC5.93□□□□□ -1.46
Shmt1P50431 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
Shmt1P50431 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC5.93□□□□□ -1.46
Shmt1P50431 Gm28153-201ENSMUST00000189853 629 ntTSL 3 BASIC5.93□□□□□ -1.46
Shmt1P50431 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC5.93□□□□□ -1.46
Shmt1P50431 Gm37336-202ENSMUST00000193705 468 ntBASIC5.93□□□□□ -1.46
Shmt1P50431 Gm17952-201ENSMUST00000193914 747 ntBASIC5.93□□□□□ -1.46
Shmt1P50431 Gm18553-201ENSMUST00000194152 634 ntBASIC5.93□□□□□ -1.46
Shmt1P50431 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC5.93□□□□□ -1.46
Shmt1P50431 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC5.93□□□□□ -1.46
Shmt1P50431 Gm18205-201ENSMUST00000209215 841 ntBASIC5.93□□□□□ -1.46
Shmt1P50431 Olfr494-202ENSMUST00000210291 947 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Shmt1P50431 2310008N11Rik-204ENSMUST00000210955 457 ntTSL 5 BASIC5.93□□□□□ -1.46
Shmt1P50431 CU024910.1-201ENSMUST00000214310 418 ntBASIC5.93□□□□□ -1.46
Shmt1P50431 AC155236.1-201ENSMUST00000220591 923 ntTSL 5 BASIC5.93□□□□□ -1.46
Shmt1P50431 AC160972.1-201ENSMUST00000220971 644 ntTSL 2 BASIC5.93□□□□□ -1.46
Shmt1P50431 Gm2099-201ENSMUST00000220979 412 ntBASIC5.93□□□□□ -1.46
Shmt1P50431 AC155305.1-201ENSMUST00000222207 319 ntBASIC5.93□□□□□ -1.46
Shmt1P50431 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC5.93□□□□□ -1.46
Shmt1P50431 Crem-202ENSMUST00000049942 953 ntTSL 2 BASIC5.93□□□□□ -1.46
Shmt1P50431 Gm6776-201ENSMUST00000057752 900 ntBASIC5.93□□□□□ -1.46
Shmt1P50431 Gm25005-201ENSMUST00000083812 156 ntBASIC5.93□□□□□ -1.46
Shmt1P50431 Olfr878-201ENSMUST00000086061 1065 ntBASIC5.93□□□□□ -1.46
Shmt1P50431 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC5.93□□□□□ -1.46
Shmt1P50431 Gm43319-201ENSMUST00000198036 2270 ntBASIC5.93□□□□□ -1.46
Shmt1P50431 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Shmt1P50431 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC5.93□□□□□ -1.46
Shmt1P50431 AC122357.2-201ENSMUST00000220732 1525 ntBASIC5.93□□□□□ -1.46
Shmt1P50431 Olfr378-201ENSMUST00000069790 1508 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
Shmt1P50431 Gm37407-201ENSMUST00000194793 1316 ntBASIC5.93□□□□□ -1.46
Shmt1P50431 Nlrp9a-203ENSMUST00000117252 2796 ntTSL 2 BASIC5.93□□□□□ -1.46
Shmt1P50431 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC5.93□□□□□ -1.46
Shmt1P50431 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Shmt1P50431 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC5.93□□□□□ -1.46
Shmt1P50431 Ceacam15-201ENSMUST00000108498 1391 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Shmt1P50431 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms