Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Nkx2-1P50220 Zc4h2-203ENSMUST00000120620 2156 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Nkx2-1P50220 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
Nkx2-1P50220 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC4.33□□□□□ -1.72
Nkx2-1P50220 Gm37303-201ENSMUST00000194202 1559 ntBASIC4.33□□□□□ -1.72
Nkx2-1P50220 Gm15011-201ENSMUST00000117724 1480 ntBASIC4.33□□□□□ -1.72
Nkx2-1P50220 Gm5715-201ENSMUST00000196854 1465 ntBASIC4.33□□□□□ -1.72
Nkx2-1P50220 Als2cr12-203ENSMUST00000188772 1382 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Nkx2-1P50220 Vmn1r41-201ENSMUST00000204949 1378 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
Nkx2-1P50220 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Nkx2-1P50220 Zfp11-201ENSMUST00000049778 3929 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Nkx2-1P50220 Mup19-202ENSMUST00000107477 720 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
Nkx2-1P50220 B4galt4-202ENSMUST00000114708 734 ntTSL 2 BASIC4.33□□□□□ -1.72
Nkx2-1P50220 Gm14711-201ENSMUST00000117056 217 ntBASIC4.33□□□□□ -1.72
Nkx2-1P50220 Gm11908-201ENSMUST00000117755 347 ntBASIC4.33□□□□□ -1.72
Nkx2-1P50220 Gm11212-201ENSMUST00000118337 618 ntBASIC4.33□□□□□ -1.72
Nkx2-1P50220 Vmn1r-ps95-201ENSMUST00000118641 903 ntBASIC4.33□□□□□ -1.72
Nkx2-1P50220 Gm7312-201ENSMUST00000118798 469 ntBASIC4.33□□□□□ -1.72
Nkx2-1P50220 Gm13484-201ENSMUST00000120738 412 ntBASIC4.33□□□□□ -1.72
Nkx2-1P50220 Gm7973-201ENSMUST00000122107 488 ntBASIC4.33□□□□□ -1.72
Nkx2-1P50220 Gm11349-201ENSMUST00000122209 1116 ntBASIC4.33□□□□□ -1.72
Nkx2-1P50220 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Nkx2-1P50220 Zfp783-203ENSMUST00000130463 537 ntTSL 2 BASIC4.33□□□□□ -1.72
Nkx2-1P50220 Gm15522-201ENSMUST00000134467 785 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Nkx2-1P50220 Lgals8-208ENSMUST00000144283 1148 ntTSL 5 BASIC4.33□□□□□ -1.72
Nkx2-1P50220 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC4.33□□□□□ -1.72
Nkx2-1P50220 Gm6245-201ENSMUST00000164699 768 ntBASIC4.33□□□□□ -1.72
Nkx2-1P50220 Samd15-201ENSMUST00000169669 1194 ntBASIC4.33□□□□□ -1.72
Nkx2-1P50220 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Nkx2-1P50220 A730017C20Rik-206ENSMUST00000175830 731 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
Nkx2-1P50220 Gm24300-201ENSMUST00000177809 109 ntBASIC4.33□□□□□ -1.72
Nkx2-1P50220 Gm24017-201ENSMUST00000178726 109 ntBASIC4.33□□□□□ -1.72
Nkx2-1P50220 Gm23952-201ENSMUST00000179380 109 ntBASIC4.33□□□□□ -1.72
Nkx2-1P50220 S100a2-201ENSMUST00000179550 315 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Nkx2-1P50220 Gm27679-201ENSMUST00000184612 84 ntBASIC4.33□□□□□ -1.72
Nkx2-1P50220 Gm38330-201ENSMUST00000192743 959 ntBASIC4.33□□□□□ -1.72
Nkx2-1P50220 Gm37002-201ENSMUST00000194560 373 ntBASIC4.33□□□□□ -1.72
Nkx2-1P50220 Gm20239-201ENSMUST00000196610 982 ntBASIC4.33□□□□□ -1.72
Nkx2-1P50220 Rrh-208ENSMUST00000200079 1106 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Nkx2-1P50220 Gm31305-202ENSMUST00000200435 761 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Nkx2-1P50220 Gm43090-201ENSMUST00000202459 314 ntBASIC4.33□□□□□ -1.72
Nkx2-1P50220 Gm4874-201ENSMUST00000203589 691 ntBASIC4.33□□□□□ -1.72
Nkx2-1P50220 Gm6261-201ENSMUST00000204707 760 ntBASIC4.33□□□□□ -1.72
Nkx2-1P50220 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC4.33□□□□□ -1.72
Nkx2-1P50220 Olfr200-ps1-201ENSMUST00000207964 874 ntBASIC4.33□□□□□ -1.72
Nkx2-1P50220 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC4.33□□□□□ -1.72
Nkx2-1P50220 4930549C15Rik-201ENSMUST00000221235 1260 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Nkx2-1P50220 CT025525.1-201ENSMUST00000226325 1054 ntBASIC4.33□□□□□ -1.72
Nkx2-1P50220 AC167013.2-202ENSMUST00000227035 333 ntBASIC4.33□□□□□ -1.72
Nkx2-1P50220 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Nkx2-1P50220 Olfr855-201ENSMUST00000061693 992 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Nkx2-1P50220 Gm5142-201ENSMUST00000066558 626 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Nkx2-1P50220 Rpl26-201ENSMUST00000073471 526 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Nkx2-1P50220 Gm25134-201ENSMUST00000082646 160 ntBASIC4.33□□□□□ -1.72
Nkx2-1P50220 Gm22807-201ENSMUST00000082737 129 ntBASIC4.33□□□□□ -1.72
Nkx2-1P50220 Olfr33-201ENSMUST00000084817 957 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Nkx2-1P50220 Obp1b-201ENSMUST00000088198 797 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Nkx2-1P50220 Olfr1016-201ENSMUST00000099915 930 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Nkx2-1P50220 Slfn14-201ENSMUST00000163961 3706 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Nkx2-1P50220 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Nkx2-1P50220 Olfr1057-202ENSMUST00000217435 3249 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Nkx2-1P50220 Gm43085-201ENSMUST00000202859 3132 ntBASIC4.33□□□□□ -1.72
Nkx2-1P50220 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Nkx2-1P50220 Olfr578-202ENSMUST00000215606 3665 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Nkx2-1P50220 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Nkx2-1P50220 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Nkx2-1P50220 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Nkx2-1P50220 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Nkx2-1P50220 Gm20667-201ENSMUST00000175674 1930 ntBASIC4.33□□□□□ -1.72
Nkx2-1P50220 Olfr920-201ENSMUST00000074740 5711 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Nkx2-1P50220 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
Nkx2-1P50220 Olfr1192-ps1-201ENSMUST00000120518 2738 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Nkx2-1P50220 Gm18186-201ENSMUST00000192239 1580 ntBASIC4.32□□□□□ -1.72
Nkx2-1P50220 Olfr403-202ENSMUST00000206114 3444 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
Nkx2-1P50220 AC112274.1-201ENSMUST00000218957 4274 ntBASIC4.32□□□□□ -1.72
Nkx2-1P50220 Gm37226-201ENSMUST00000191644 3255 ntBASIC4.32□□□□□ -1.72
Nkx2-1P50220 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Nkx2-1P50220 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Nkx2-1P50220 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Nkx2-1P50220 Gm15402-201ENSMUST00000114051 670 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Nkx2-1P50220 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC4.32□□□□□ -1.72
Nkx2-1P50220 Gm14106-201ENSMUST00000119382 438 ntBASIC4.32□□□□□ -1.72
Nkx2-1P50220 Gm14712-201ENSMUST00000120195 772 ntBASIC4.32□□□□□ -1.72
Nkx2-1P50220 Gm11533-201ENSMUST00000120287 477 ntBASIC4.32□□□□□ -1.72
Nkx2-1P50220 Gm15022-201ENSMUST00000122074 746 ntBASIC4.32□□□□□ -1.72
Nkx2-1P50220 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Nkx2-1P50220 Gm16571-201ENSMUST00000159112 291 ntBASIC4.32□□□□□ -1.72
Nkx2-1P50220 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Nkx2-1P50220 Vmn1r170-201ENSMUST00000170166 915 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Nkx2-1P50220 Gm22411-201ENSMUST00000175462 126 ntBASIC4.32□□□□□ -1.72
Nkx2-1P50220 Gm22002-201ENSMUST00000175622 125 ntBASIC4.32□□□□□ -1.72
Nkx2-1P50220 Gm16531-201ENSMUST00000180658 967 ntBASIC4.32□□□□□ -1.72
Nkx2-1P50220 Gm26665-201ENSMUST00000181378 839 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Nkx2-1P50220 4930461G14Rik-201ENSMUST00000181967 843 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Nkx2-1P50220 Gm3428-202ENSMUST00000184555 416 ntTSL 5 BASIC4.32□□□□□ -1.72
Nkx2-1P50220 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Nkx2-1P50220 Gm20830-202ENSMUST00000190426 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Nkx2-1P50220 Gm28640-201ENSMUST00000190918 550 ntBASIC4.32□□□□□ -1.72
Nkx2-1P50220 Gm37235-201ENSMUST00000195171 59 ntBASIC4.32□□□□□ -1.72
Nkx2-1P50220 Mir142-201ENSMUST00000198092 64 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms