Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 AC155923.1-201ENSMUST00000215676 356 ntBASIC5.04□□□□□ -1.6
HttP42859 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC5.04□□□□□ -1.6
HttP42859 Olfr664-201ENSMUST00000072887 966 ntAPPRIS P5 BASIC5.04□□□□□ -1.6
HttP42859 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
HttP42859 Gm5591-201ENSMUST00000079759 3441 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HttP42859 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
HttP42859 Rbbp6-201ENSMUST00000052135 6184 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
HttP42859 AC121094.1-201ENSMUST00000224766 1345 ntBASIC5.04□□□□□ -1.6
HttP42859 Gm37834-201ENSMUST00000194517 3035 ntBASIC5.04□□□□□ -1.6
HttP42859 Gm37143-201ENSMUST00000195180 3259 ntBASIC5.04□□□□□ -1.6
HttP42859 Dio2-201ENSMUST00000082432 5815 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HttP42859 Gm44667-201ENSMUST00000207632 3337 ntBASIC5.04□□□□□ -1.6
HttP42859 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HttP42859 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
HttP42859 Gm12458-201ENSMUST00000119387 495 ntBASIC5.04□□□□□ -1.6
HttP42859 AC154419.1-201ENSMUST00000227627 272 ntBASIC5.04□□□□□ -1.6
HttP42859 Snora7a-201ENSMUST00000082629 140 ntBASIC5.04□□□□□ -1.6
HttP42859 Fpr-rs7-201ENSMUST00000095637 1017 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
HttP42859 Gm7240-204ENSMUST00000222847 2239 ntTSL 2 BASIC5.04□□□□□ -1.6
HttP42859 Olfr472-201ENSMUST00000209670 5290 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
HttP42859 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HttP42859 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HttP42859 Gm42876-201ENSMUST00000196989 3215 ntBASIC5.04□□□□□ -1.6
HttP42859 Yes1-202ENSMUST00000168707 2259 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HttP42859 Btbd35f16-201ENSMUST00000185755 1949 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
HttP42859 Btbd35f15-201ENSMUST00000186329 1917 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
HttP42859 Gm37018-201ENSMUST00000192441 3869 ntBASIC5.04□□□□□ -1.6
HttP42859 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC5.04□□□□□ -1.6
HttP42859 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
HttP42859 Map3k7-204ENSMUST00000108184 5491 ntTSL 5 BASIC5.04□□□□□ -1.6
HttP42859 Gm15076-201ENSMUST00000117076 474 ntBASIC5.03□□□□□ -1.6
HttP42859 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HttP42859 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HttP42859 Gm34779-201ENSMUST00000210036 263 ntBASIC5.03□□□□□ -1.6
HttP42859 AC153729.2-201ENSMUST00000215166 560 ntTSL 3 BASIC5.03□□□□□ -1.6
HttP42859 Svep1-201ENSMUST00000042850 11629 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HttP42859 Gm19136-201ENSMUST00000190706 2067 ntBASIC5.03□□□□□ -1.6
HttP42859 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HttP42859 Vcan-206ENSMUST00000159910 8332 ntTSL 5 BASIC5.03□□□□□ -1.6
HttP42859 Ephb2-202ENSMUST00000105845 10902 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
HttP42859 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HttP42859 Gm19666-201ENSMUST00000198176 1893 ntBASIC5.03□□□□□ -1.6
HttP42859 Scn11a-201ENSMUST00000070617 5837 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HttP42859 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
HttP42859 Srcap-207ENSMUST00000187040 10654 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
HttP42859 Mgam-202ENSMUST00000201148 6488 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HttP42859 Mgam-201ENSMUST00000071535 6488 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HttP42859 Gm15151-201ENSMUST00000117106 177 ntBASIC5.03□□□□□ -1.6
HttP42859 Gm6754-201ENSMUST00000117124 913 ntBASIC5.03□□□□□ -1.6
HttP42859 Gm45499-201ENSMUST00000211656 280 ntBASIC5.03□□□□□ -1.6
HttP42859 CT025686.1-201ENSMUST00000227592 438 ntBASIC5.03□□□□□ -1.6
HttP42859 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HttP42859 Gm37254-201ENSMUST00000193542 3901 ntBASIC5.03□□□□□ -1.6
HttP42859 AC124446.1-201ENSMUST00000221027 2644 ntBASIC5.03□□□□□ -1.6
HttP42859 Olfr980-202ENSMUST00000216463 3050 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
HttP42859 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
HttP42859 Btbd35f2-201ENSMUST00000179991 1949 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
HttP42859 Zfp825-203ENSMUST00000221173 1549 ntAPPRIS ALT2 TSL 3 BASIC5.03□□□□□ -1.6
HttP42859 AC121997.2-203ENSMUST00000228613 4192 ntBASIC5.03□□□□□ -1.6
HttP42859 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HttP42859 Olfr1406-203ENSMUST00000215878 3149 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
HttP42859 Gm42860-201ENSMUST00000196492 3991 ntBASIC5.03□□□□□ -1.6
HttP42859 Gm29045-201ENSMUST00000187278 698 ntBASIC5.03□□□□□ -1.6
HttP42859 Gm38270-201ENSMUST00000192721 407 ntBASIC5.03□□□□□ -1.6
HttP42859 Gm8023-201ENSMUST00000195298 903 ntBASIC5.03□□□□□ -1.6
HttP42859 Gm18452-201ENSMUST00000202968 1111 ntBASIC5.03□□□□□ -1.6
HttP42859 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC5.03□□□□□ -1.6
HttP42859 Gm45574-201ENSMUST00000210921 331 ntBASIC5.03□□□□□ -1.6
HttP42859 AC159821.1-201ENSMUST00000214934 248 ntTSL 3 BASIC5.03□□□□□ -1.6
HttP42859 AC121947.1-201ENSMUST00000221755 1145 ntBASIC5.03□□□□□ -1.6
HttP42859 AC119241.1-201ENSMUST00000223651 534 ntBASIC5.03□□□□□ -1.6
HttP42859 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
HttP42859 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
HttP42859 Ahcyl2-203ENSMUST00000115238 5129 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HttP42859 Polr1a-201ENSMUST00000055296 9216 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HttP42859 Myom1-202ENSMUST00000073211 5602 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
HttP42859 Gm43281-201ENSMUST00000202522 2704 ntBASIC5.02□□□□□ -1.61
HttP42859 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC5.02□□□□□ -1.61
HttP42859 Vmn1r57-201ENSMUST00000170780 933 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
HttP42859 Gm27940-201ENSMUST00000184449 98 ntBASIC5.02□□□□□ -1.61
HttP42859 Gm29489-201ENSMUST00000188934 324 ntBASIC5.02□□□□□ -1.61
HttP42859 Gm37636-201ENSMUST00000193583 359 ntBASIC5.02□□□□□ -1.61
HttP42859 Gm44824-201ENSMUST00000207021 229 ntBASIC5.02□□□□□ -1.61
HttP42859 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HttP42859 Plce1-203ENSMUST00000182267 7234 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
HttP42859 Il1rl1-201ENSMUST00000053043 5053 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HttP42859 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
HttP42859 Dleu2-202ENSMUST00000180917 3544 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HttP42859 Akt3-203ENSMUST00000111160 4735 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HttP42859 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
HttP42859 Olfr685-204ENSMUST00000217432 3246 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
HttP42859 AC112972.2-201ENSMUST00000228702 2210 ntBASIC5.02□□□□□ -1.61
HttP42859 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
HttP42859 Mtm1-213ENSMUST00000171933 3488 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HttP42859 Adcy10-203ENSMUST00000111440 5078 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
HttP42859 Gm24127-201ENSMUST00000104110 130 ntBASIC5.02□□□□□ -1.61
HttP42859 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HttP42859 Xlr3e-ps-201ENSMUST00000119644 682 ntBASIC5.02□□□□□ -1.61
HttP42859 4930440I19Rik-201ENSMUST00000144728 992 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HttP42859 Gm23782-201ENSMUST00000157939 120 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms